Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01659 ATGGAGAACAGTATGAAGAAACATGCCGACAACCTCATGTGTTTTTTCGAGGAGATTAGATATAGACTATCACAGTTGGAGTTATATTGCTACAATCTTGACAAATCTATCGGAGAAATCAGATCTGATTTAAATCGTGATCATAAGGAGCAAGATTCAAAGCTCAAATCTCTTGAAAAGCATCTTCAGGAAGTTAATCGGTCACAGCCTGCAGGAACCCCGACCATAGAAAGACCATGCCGGCAGATTCGATTCGCAATTACTACCAAGCTCGCGGTCATTTCGCAGCTACAGCAACCAGCCGCACCACACACCTGCGACGATGACGCCAACACCCACACCGATCTGACCCCAGTGATCTCCGCCTCCCTCCGATTCACAGCCCTGCCACAACAACTCGACACCAACCGCGGTCTCGCAAGCCCTTCCGCCGTGCCACCACGTCTCCAATCCGCACGCTGCTACAAACCCAATCATTGGCCGCCATCGTCCAATCGTGAATCACCGGAAATTCATCGACATCCATCACCTCTCAAGCCTCAGCGTAAAACTGCGAACTTTGGTCATCACCTTCAGAACCTTTGTGTGGACAGGTAA 597 0.4941 MENSMKKHADNLMCFFEEIRYRLSQLELYCYNLDKSIGEIRSDLNRDHKEQDSKLKSLEKHLQEVNRSQPAGTPTIERPCRQIRFAITTKLAVISQLQQPAAPHTCDDDANTHTDLTPVISASLRFTALPQQLDTNRGLASPSAVPPRLQSARCYKPNHWPPSSNRESPEIHRHPSPLKPQRKTANFGHHLQNLCVDR 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01659 198 MobiDBLite consensus disorder prediction 136 188 - -
Vifa1g01659 198 Coils Coil 41 68 - -
Vifa1g01659 198 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 2 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01659 Vifa-Chr1 270871290 270872997 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01659 1 65 Trihelix Transcription Factor Family AT3G01560 33.846 3.82e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01659 - - aip:107633963 120.553