Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01651 ATGGCAATGATGAAGTCTGGTTTTATCTTGGTCATGTCAATGATGTTTCTCATCTCTTCGAGTTCATATGGTTACAAGTTCAACGTTGGTGGCAAAGATGGCTGGGCTGTTAAACCCTCACAATGTTACAGTCAGTGGGCTCAGAAAAATAGGTTTCAAATCAACGACACACTTTATTTTAGGTATAACAAAGGATCTGATTCAGTGTTGGTGGTAAATAACCAAGATTACAACTCATGCAATACCAACAATCCAATTCTCAAATTGGACGGTGGAAACTCAATTTTTAAATTTGACAGATCAGGTCCTTTTTTCTTCATAAGTGGAAACGTTGAAAATTGCCAAAAAGGTGAGAAGTTAATTGTGGTGGTTTTGTCTCCAAACCACAACCGTAAACCACGTCATGGTCCTTCATCATCACCTTCTCCGGCTGACTCACCGGCGGAGAATACTCCTTCAAATTCCAGCGTAGACATTACTCCGGCGATGTCTCCGGCTCATTCGGGTTCAGCTATGTTAAGTGGTTCTATTGGTGTTAGTGTTGGGGTGGCTCTAGTTTTAGGAATCTTTGTTTTCTAA 579 0.4076 MAMMKSGFILVMSMMFLISSSSYGYKFNVGGKDGWAVKPSQCYSQWAQKNRFQINDTLYFRYNKGSDSVLVVNNQDYNSCNTNNPILKLDGGNSIFKFDRSGPFFFISGNVENCQKGEKLIVVVLSPNHNRKPRHGPSSSPSPADSPAENTPSNSSVDITPAMSPAHSGSAMLSGSIGVSVGVALVLGIFVF 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01651 192 MobiDBLite consensus disorder prediction 128 163 - -
Vifa1g01651 192 PANTHER BLUE COPPER PROTEIN 25 148 IPR039391 GO:0009055
Vifa1g01651 192 CDD OsENODL1_like 25 125 IPR041846 -
Vifa1g01651 192 MobiDBLite consensus disorder prediction 132 163 - -
Vifa1g01651 192 SUPERFAMILY Cupredoxins 24 125 IPR008972 -
Vifa1g01651 192 Gene3D - 24 129 IPR008972 -
Vifa1g01651 192 FunFam Early nodulin-like protein 1 24 129 - -
Vifa1g01651 192 Pfam Plastocyanin-like domain 35 117 IPR003245 GO:0009055
Vifa1g01651 192 ProSiteProfiles Phytocyanin domain profile. 25 126 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01651 Vifa-Chr1 269939435 269940354 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01651 8 190 Phytocyanin Superfamily AT4G28365 48.958 1.28e-51 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01651 - - psat:127086907 330.487