Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g01637 | ATGAAGTCTTCGAAGCTGAAAAAAACTATTCTCGTTTTTTTCGCGGCGTGTTTATTAATCGCCATTGTTTCCGGCGCCGATCTAGCTTCCGACAGAGAAACTCTACTGATTTTAAGAAACACGGTTGGAGGACGAACCCGATCATGGAACGCGTCGGAGATGAATCCGTGTTTATGGTTCGGCGTTTCCTGCAAAAACGAAAGAGTCACGGAGTTGAGATTACCGGGGATGGGTCTCGCCGGTGATCTTCCGGTTGGTTTAGGAAACCTCACTGAATTGATGACACTTTCTCTCCGGTTCAACTTGTTAACTGGAACAATTCCTTGGGATTTTTCGAAACTTGTCTCTCTCCGAAGCCTTTACCTTCAGAATAATTTTCTCTCCGGCGAGGTTCCTGAATTTGTGTTTGGGTTGCAGAATTTGACACGGTTGAGTTTAGCTCATAATAATTTCAGCGGTGGAATTTCTTTTGGTTTCAATAATCTCACTCGTTTGGATACACTGTCTTTGGAGCAAAACCGGTTCACCGGTTCGGTCCCGGACCTTAATGTTCCTCCTTTACATGTATTCAACGTGTCGTTTAACAATTTAACCGGGCCGATTCCGTCGAGGTTTTCGCGTTTAGATATAAGCGCTTTTTCTGGCAATGAGCTTTGTGGGAGTCCCCTTCAAATACCTTGTCCTGGAAACAATGACAGAAATAAGAAAAATGGGTTATCTGGTGGAGCTATTGCTGGGATTGTAATTGGGTGTGTTTTTGGTTTTGTGTTGATTCTGGTTCTTTTGGTGTTTTTATGTAGAAAAAGAACAAAAAGTGATTCTGATAATGTAGCACATGCCAAGAGTGTTGATGTTGAAAATAGTGCTGGTGATGGTGGCGTGAGTAATTCAGGTTCTGGTTTGGTTTCTGGTTCGGCTTCGGTTTCAGCTTCGGGTGTGTCATTACAAAAGAGTTTGGTGTTTGTTGGGAATGTGACTAGAAAGTTTAGTTTAGATGATTTGTTAAGAGCTTCTGCTGAAGTTTTGGGAAAAGGGACATTTGGAACAGCTTATAAGGCAGCATTGGAGATGGGAGTGACTGTGGCTGTGAAAAGGTTGAAGGATGTTACTGCAAGTGAAAGGGAATTCAAGGAGAAAATGGAGGAGGTGGGAAAATTGGTTCATGAGAAACTGGTCCCACTTAGGGGTTATTATTATAGTAGAGATGAAAAGCTTATTGTGTATGATTACATGCCAATGGGAAGCTTATCTGCACTCTTGCATGCAAATAATGGAACTGGAAGGACTCCACTAAATTGGGAAACAAGGTCAACCATAGCCCTTGGTGCTGCCCAAGGGATTGCATACATACACTCACAAAGTCCAACATCTTCTCATGGAAACATCAAGTCATCAAACATCCTTCTCACCAAATCTTACGAATCCCGTGTCTCCGACTTCGGCCTCGCGTATCTCGCTCTTCCAACCGCTACACCCAACCGAGTTTCTGGTTACCGTGCACCAGAGGTCACTGACACCCGCAAAGTATCCCAAAAAGCAGACGTCTACAGCTTCGGTATTATGCTTCTTGAGCTTCTCACAGGAAAAGCTCCTACTCATTCTTTGCTGAATGATGAAGGAGTAGACCTACCGAGATGGGTCCAATCGATCATTCAAGACGAATGGAACACTGATGTTTTCGACATGGAGCTTCTTAGATACCAAAACGTTGAGGACGAAATGGTGAAGCTTTTGCAGCTTGCTCTTGAATGTACTGCTCAATATCCTGATAAGAGACCTTCCATGGATGTGGTTGTAAGGTTGATTGAGGAAATTTGTCCTCCTAGTATAGTGAAAGAGCACGAAGAGATTATTGAGGATTCATGA | 1866 | 0.433 | MKSSKLKKTILVFFAACLLIAIVSGADLASDRETLLILRNTVGGRTRSWNASEMNPCLWFGVSCKNERVTELRLPGMGLAGDLPVGLGNLTELMTLSLRFNLLTGTIPWDFSKLVSLRSLYLQNNFLSGEVPEFVFGLQNLTRLSLAHNNFSGGISFGFNNLTRLDTLSLEQNRFTGSVPDLNVPPLHVFNVSFNNLTGPIPSRFSRLDISAFSGNELCGSPLQIPCPGNNDRNKKNGLSGGAIAGIVIGCVFGFVLILVLLVFLCRKRTKSDSDNVAHAKSVDVENSAGDGGVSNSGSGLVSGSASVSASGVSLQKSLVFVGNVTRKFSLDDLLRASAEVLGKGTFGTAYKAALEMGVTVAVKRLKDVTASEREFKEKMEEVGKLVHEKLVPLRGYYYSRDEKLIVYDYMPMGSLSALLHANNGTGRTPLNWETRSTIALGAAQGIAYIHSQSPTSSHGNIKSSNILLTKSYESRVSDFGLAYLALPTATPNRVSGYRAPEVTDTRKVSQKADVYSFGIMLLELLTGKAPTHSLLNDEGVDLPRWVQSIIQDEWNTDVFDMELLRYQNVEDEMVKLLQLALECTAQYPDKRPSMDVVVRLIEEICPPSIVKEHEEIIEDS | 621 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g01637 | 621 | SUPERFAMILY | L domain-like | 44 | 208 | - | - | |
Vifa1g01637 | 621 | Gene3D | Phosphorylase Kinase; domain 1 | 304 | 410 | - | - | |
Vifa1g01637 | 621 | Gene3D | Ribonuclease Inhibitor | 184 | 231 | IPR032675 | - | |
Vifa1g01637 | 621 | ProSitePatterns | Protein kinases ATP-binding region signature. | 342 | 364 | IPR017441 | GO:0005524 | |
Vifa1g01637 | 621 | Gene3D | Transferase(Phosphotransferase) domain 1 | 411 | 617 | - | - | |
Vifa1g01637 | 621 | Pfam | Leucine rich repeat N-terminal domain | 29 | 64 | IPR013210 | - | |
Vifa1g01637 | 621 | CDD | STKc_IRAK | 342 | 605 | - | - | |
Vifa1g01637 | 621 | FunFam | pollen receptor-like kinase 1 | 305 | 410 | - | - | |
Vifa1g01637 | 621 | PANTHER | OS05G0588300 PROTEIN | 12 | 607 | - | - | |
Vifa1g01637 | 621 | SUPERFAMILY | Protein kinase-like (PK-like) | 340 | 602 | IPR011009 | - | |
Vifa1g01637 | 621 | FunFam | Probable inactive receptor kinase RLK902 | 28 | 183 | - | - | |
Vifa1g01637 | 621 | Gene3D | Ribonuclease Inhibitor | 29 | 183 | IPR032675 | - | |
Vifa1g01637 | 621 | FunFam | Probable inactive receptor kinase At1g48480 | 411 | 612 | - | - | |
Vifa1g01637 | 621 | ProSiteProfiles | Protein kinase domain profile. | 336 | 617 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g01637 | 621 | Pfam | Protein kinase domain | 339 | 598 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g01637 | Vifa-Chr1 | 268514839 | 268517817 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g01637 | 27 | 609 | Receptor kinase-like Gene Family | AT1G48480 | 55.429 | 0.0 | 665 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Vifa1g01637 | Pkinase | 2e-35 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g01637 | - | - | gmx:100801582 | 809.29 |