Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g01534 | ATGGCAGAGTTTACATTGAATTCAATGAAGTTCTACTCATCTCCATTGCAAGCTTTCCTTTTTATCATTGTAATTCTTTCTCCTCTAGTTATTGCTGACCTGAATTCTGATAAGCAAGCCCTTCTTAATTTTGTTACTTCTGTCCCTCATCGACGGAACCTTAAATGGGACCTATCTACCTCAATATGTACATCTTGGATAGGCATCACATGCAATCCAAACCTTACTCGTGTTGTTTCTGTTCGGCTCCCTGGAGTCGGACTAGTAGGCACCATTCCAGCCGATACACTCGGCAAAATTGACTCACTCAAAACTATCAGCCTTCGCTCGAACTTACTTAGTGGAAATCTACCTCAGGATATTACTTCTCTTCCGTCTCTACAATATCTCTACCTTCAACACAATAACTTTTCTGGTAAGTTACCAACCTCGTTGTCACCGCAACTCAATGCACTTGTTTTGTCATACAATTCATTCACTGGTAGCATTCCAAAGACACTGCAAAACTTAACACAACTAACTCATTTGAGCCTCGAGAACAATTCGTTATCTGGACCGATACCTGATCTCCATGTCAATCTCAAGCAGTTGAATTTAAGTTATAACCATTTGAATGGCTCTATCCCTTCGTCTCTACATAGTTTCTCAAGTTCATCCTTTGAAGGGAACTCTCTTTTATGTGGATTACCTCTAAAGTCGTGCTCATCAGTCCCTCGTTCATCCGCGCCTCCTGCATCTGCTCCTGTAAGACATAACTCCAAAAGTAAACTTAGTAAAGGAGCTATCATTGCAATTTCTGTTGGTGGAGCTGCTCTGTTGTTTTTTGTAGTTCTTGTCATTGTTCTTTGTTGTTTAAAGAAAAAAGATAACGGAAGCTCGAGAGTTGTTAAAGATAAGGGGCCTAGTGGCGGTGGTGGAAGGACTGAAAAACCGAAAGAAGAGTTTGGAAGTGGCGTGCAAGAATCTGAGAAAAACAAATTGGTTTTCTTTGAGGGGTGCTCTTATAATTTCGATCTCGAGGATTTGCTAAGGGCTTCGGCTGAGGTTCTCGGAAAGGGAAGTTATGGAACCGCATATAAGGCTATCTTGGAGGAAGCAACAACAGTTGTAGTGAAAAGGTTGAAAGAAGTTGTGGTAGGAAAGAGGGAGTTTGAACAGCAGATGGAGATTGTTGGAAGCATTGGAAATCACCCGAATCTCGTTCCACTTCGTGCTTATTATTATTCGAAGGATGAGAAGCTTTTGGTTTGTGACTATTTCCCAAATGGCAATCTATCTGTACTCTTGCATGGTAGTAGGACAGGCGGAAGAGCTACCTTAGATTGGAACATGCGAGTAAAAATCACACTCGGAATTGCTCGGGGAATTGCGCATTTACATTCAGTTGGCGGTCCAAAATTCACACACGGAAATGTGAAATCCTCCAATGTCCTCATAAGCCAAGATAACGATGGCTGCATTTCAGATTTCGGCCTGACACCAATCATGAACGTTCCTGCAACCCCTTCCAGAACCGCAGGCTACCGTGCTCCCGAGGTAATGGAAACTCGAAAGCACACTCATAAATCAGACGTGTACAGTTTCGGTGTCCTCCTTTTGGAAATGCTTACTGGTAAAGCGCCACAACAGTCTCCGGTACGCGATGACATGGTTGATCTGCCTAGGTGGGTTCAGTCTGTTGTTCGGGAGGAATGGACCGCTGAGGTTTTCGATGTGGAGCTAATGAGGTACCAAAATATTGAAGAAGAAATGGTGCAAATGTTGCAAATTGGCATGGCTTGTGTTGCCAAGGTTCCGGATATGAGGCCTAACATGGAGGAAGTAGTGAGAATGATTGAAGAAATTCGACAATCTGACTCGGATAACCGACCTTCTTCAGACGAGAATAAATCCAAGGATTTAAATGTTCAAACACCATGA | 1920 | 0.4281 | MAEFTLNSMKFYSSPLQAFLFIIVILSPLVIADLNSDKQALLNFVTSVPHRRNLKWDLSTSICTSWIGITCNPNLTRVVSVRLPGVGLVGTIPADTLGKIDSLKTISLRSNLLSGNLPQDITSLPSLQYLYLQHNNFSGKLPTSLSPQLNALVLSYNSFTGSIPKTLQNLTQLTHLSLENNSLSGPIPDLHVNLKQLNLSYNHLNGSIPSSLHSFSSSSFEGNSLLCGLPLKSCSSVPRSSAPPASAPVRHNSKSKLSKGAIIAISVGGAALLFFVVLVIVLCCLKKKDNGSSRVVKDKGPSGGGGRTEKPKEEFGSGVQESEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAILEEATTVVVKRLKEVVVGKREFEQQMEIVGSIGNHPNLVPLRAYYYSKDEKLLVCDYFPNGNLSVLLHGSRTGGRATLDWNMRVKITLGIARGIAHLHSVGGPKFTHGNVKSSNVLISQDNDGCISDFGLTPIMNVPATPSRTAGYRAPEVMETRKHTHKSDVYSFGVLLLEMLTGKAPQQSPVRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIGMACVAKVPDMRPNMEEVVRMIEEIRQSDSDNRPSSDENKSKDLNVQTP | 639 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g01534 | 639 | Pfam | Leucine rich repeat | 91 | 137 | IPR001611 | GO:0005515 | |
Vifa1g01534 | 639 | Gene3D | Ribonuclease Inhibitor | 194 | 235 | IPR032675 | - | |
Vifa1g01534 | 639 | MobiDBLite | consensus disorder prediction | 303 | 319 | - | - | |
Vifa1g01534 | 639 | Gene3D | Ribonuclease Inhibitor | 35 | 146 | IPR032675 | - | |
Vifa1g01534 | 639 | Gene3D | Ribonuclease Inhibitor | 147 | 191 | IPR032675 | - | |
Vifa1g01534 | 639 | FunFam | pollen receptor-like kinase 1 | 312 | 419 | - | - | |
Vifa1g01534 | 639 | Pfam | Leucine Rich Repeat | 193 | 215 | IPR001611 | GO:0005515 | |
Vifa1g01534 | 639 | ProSiteProfiles | Protein kinase domain profile. | 344 | 639 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g01534 | 639 | Gene3D | Transferase(Phosphotransferase) domain 1 | 420 | 638 | - | - | |
Vifa1g01534 | 639 | FunFam | Leucine-rich repeat receptor-like protein kinase | 147 | 234 | - | - | |
Vifa1g01534 | 639 | MobiDBLite | consensus disorder prediction | 291 | 319 | - | - | |
Vifa1g01534 | 639 | ProSiteProfiles | Leucine-rich repeat profile. | 193 | 215 | IPR001611 | GO:0005515 | |
Vifa1g01534 | 639 | SUPERFAMILY | Protein kinase-like (PK-like) | 348 | 622 | IPR011009 | - | |
Vifa1g01534 | 639 | FunFam | Leucine-rich repeat receptor-like protein kinase | 36 | 146 | - | - | |
Vifa1g01534 | 639 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 420 | 626 | - | - | |
Vifa1g01534 | 639 | SUPERFAMILY | L domain-like | 39 | 233 | - | - | |
Vifa1g01534 | 639 | MobiDBLite | consensus disorder prediction | 614 | 639 | - | - | |
Vifa1g01534 | 639 | Pfam | Protein kinase domain | 347 | 610 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g01534 | 639 | PANTHER | OS05G0588300 PROTEIN | 20 | 627 | - | - | |
Vifa1g01534 | 639 | Pfam | Leucine rich repeat N-terminal domain | 35 | 72 | IPR013210 | - | |
Vifa1g01534 | 639 | Gene3D | Phosphorylase Kinase; domain 1 | 312 | 419 | - | - | |
Vifa1g01534 | 639 | MobiDBLite | consensus disorder prediction | 614 | 630 | - | - | |
Vifa1g01534 | 639 | CDD | STKc_IRAK | 350 | 615 | - | - | |
Vifa1g01534 | 639 | ProSitePatterns | Protein kinases ATP-binding region signature. | 350 | 381 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g01534 | Vifa-Chr1 | 251156965 | 251158990 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g01534 | 4 | 637 | Receptor kinase-like Gene Family | AT5G58300 | 67.802 | 0.0 | 864 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Vifa1g01534 | Pkinase | 4.7e-37 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g01534 | - | - | gmx:100818344 | 956.436 |