Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01476 ATGGATTCTCAAAATTTTGACTTATTACCCCTTGTCTCCCTTTTCCTCTTCATCCTTGTGGCGCTAAACATTGCAAGGAATCTCAAGAAAAAAACCTCATCTCCAAACCTACTACCAGGACCATGGAAGCTACTTATTATAGGACACCTTGGAGAGATCTTTGCAGTTGTTGTTTCCTCACCAGAGTATGCTAAGGAGAAAAATATGCACAATGGAGCTTTTAACGCAAAAGCGTCAAGGATCGGGATCCGCCATCAACATCACTCAACTTGTGGTGCTTTTGCTATTATTACAAAGGCTGCACTTGGCAAGAACTGCAAAGTGCAAGAAGAGCTTGCGTGTTTGGGAAATGGAGAATCTGTTGCGGGAGGTTTTGACATAGGTGAACTGTTTCCATCTGCTAAATGGCTTCAAGTTGTTTCTGGTTTGAGGCCGAAACTCGAGAGGCTGCATAGACAAATTGATGAGTTGCTAGTAAAGGTTATTATTGAACATAAGGAAGCTAAGTTGAAAGAAAATCAAGGCCAATGTGGTGAAGTAGAAGAAGATCTAGTAGATGTTCTTCTAAATTTTCAGTGTGGTAATGATAGTTTGAAAAAGGGGTCTAGAGGGTATATAGAATGA 624 0.4054 MDSQNFDLLPLVSLFLFILVALNIARNLKKKTSSPNLLPGPWKLLIIGHLGEIFAVVVSSPEYAKEKNMHNGAFNAKASRIGIRHQHHSTCGAFAIITKAALGKNCKVQEELACLGNGESVAGGFDIGELFPSAKWLQVVSGLRPKLERLHRQIDELLVKVIIEHKEAKLKENQGQCGEVEEDLVDVLLNFQCGNDSLKKGSRGYIE 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01476 207 Gene3D Cytochrome P450 27 201 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01476 207 SUPERFAMILY Cytochrome P450 34 196 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01476 207 Coils Coil 163 183 - -
Vifa1g01476 207 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 95 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01476 Vifa-Chr1 241648018 241649160 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01476 96 199 Cytochrome P450 AT4G13290 32.407 1.83e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01476 - - vum:124840650 119.398