Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01464 ATGACACTTTCTTCTTCTTGTTCTTTTTCTAAAGTCTCAATAAGCTCTTTTTGCTTTGTTTTGTTCATGTTTTTGCTTATAGGAAACTCTTCAGCTCAACTCTCTGAAAATTTCTATGGTAAAAAGTGTCCCAATGTTTTCAATGTTGTTAGCTCTATTGTTCACTCTGTGGTGGCTAAGGAACCTCGCATGGGAGCATCTCTACTTCGCCTCTTCTTTCATGACTGCTTTGTTAATGGTTGTGATGGATCAGTGCTACTTGATGACACATCTTCCATGAAAGGAGAGAAAACTGCACCTCCTAACAAAGGTTCTTTGAGAGGTTTTGAAGTAATTGATGTAATAAAATCTAAGGTGGAAGCTGCATGTCCTGGTGTTGTTTCATGTGCTGATATTGTAGCCATTACTGCTCGTGACTCTGTTGTAAATCTTGGAGGTCCTTATTGGAAGGTTAAACTAGGAAGAAGAGACTCAAAGACAGCAAGCTTCAACGATGCAAGCAGTGGTGCTATTCCATCCCCCTTTTCTACTCTTGCCAACCTTATCAATAGGTTTAAAGCCCAAGGACTCTCTACTAAGGACTTGGTAGCCTTATCTGGAGCTCACACTATTGGCAAAGCAAGGTGTGTTGTTTATAGAGATCACATTTACAATGATACAGATATTGATAGTGCATTTGCCAAGTCAAGGCAAAGGAACTGTCCAAGGAAAAGTGGTTCAATAAAGGACAACAATGTAGCATTTCTAGATTACAAAACTCCAAACCATTTTGACAATGTCTACTACGACAATCTCATCAACAAAAAGGGACTCCTTCATTCTGATCAAGTGCTTTTCAATGGAGGTTCTACTGATTCATTGGTTAAAACTTATAGTAATAATCCAAAGGCCTTTAAATCTGATTTTGTTACTGCTATAATTAAGATGGGAAACATTAAACCTCTTACAGGATCGAAAGGGGAGATTAGGAAACAATGCAGAAGAGCCAATTAA 993 0.3827 MTLSSSCSFSKVSISSFCFVLFMFLLIGNSSAQLSENFYGKKCPNVFNVVSSIVHSVVAKEPRMGASLLRLFFHDCFVNGCDGSVLLDDTSSMKGEKTAPPNKGSLRGFEVIDVIKSKVEAACPGVVSCADIVAITARDSVVNLGGPYWKVKLGRRDSKTASFNDASSGAIPSPFSTLANLINRFKAQGLSTKDLVALSGAHTIGKARCVVYRDHIYNDTDIDSAFAKSRQRNCPRKSGSIKDNNVAFLDYKTPNHFDNVYYDNLINKKGLLHSDQVLFNGGSTDSLVKTYSNNPKAFKSDFVTAIIKMGNIKPLTGSKGEIRKQCRRAN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01464 330 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g01464 330 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g01464 330 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g01464 330 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g01464 330 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g01464 330 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01464 330 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01464 330 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01464 330 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01464 330 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01464 330 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01464 330 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01464 330 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01464 330 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01464 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Vifa1g01464 330 Gene3D Peroxidase, domain 2 172 309 - -
Vifa1g01464 330 CDD secretory_peroxidase 33 328 IPR033905 GO:0004601|GO:0042744
Vifa1g01464 330 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Vifa1g01464 330 PANTHER PEROXIDASE 72-RELATED 27 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01464 330 Pfam Peroxidase 52 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g01464 330 Gene3D - 37 330 - -
Vifa1g01464 330 FunFam Peroxidase 37 175 - -
Vifa1g01464 330 ProSiteProfiles Plant heme peroxidase family profile. 33 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g01464 330 SUPERFAMILY Heme-dependent peroxidases 33 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa1g01464 330 FunFam Peroxidase 172 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01464 Vifa-Chr1 239577039 239580525 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01464 15 330 Peroxidase AT5G58400 62.342 3.71e-144 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01464 K00430 - gmx:100812478 473.011