Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01461 ATGACTTCTAGTCAAATATTTGTTATGGTGACTTTGGCCTCACTATTGATCTCTTCCAATGCATTGCTCACTCCTCATTTTTATGATAAGGTTTGCCCTCAAGCATTGCCAGTCATAAAGTCAGTTGTTAAGGAAGCAATTCTTAAGGAAAAACGCATTGGGGCATCACTCCTACGCCTGCATTTCCATGATTGCTTCGTTAATGGATGTGATGGATCAGTTCTGCTAGATGACACTAAGAACTTCACAGGGGAGAAGACAGCTCTTCCAAATATTAATTCAATCCGAGGATTTTCTGTGATTGATGAAATCAAAGCAGCTGTTGATAAAGCATGTAAACGCCCTGTGGTTTCATGTGCTGATATTTTAGCCATTGCTGCTCGTGATTCTGTTGCCATATTGGGAGGTCCACAACTTTTCTATAATGTGTTATTGGGAAGAAGAGATGCAAGAACAGCAAGCAAATCAGCTGCAAACACAAATCTCCCTCCTCCAACATTCAGCTTCTCACAGCTTATTTCCAACTTCAAATCACATGGATTAGATGTAAAAGACCTTGTAGCACTTTCTGGTGGCCACACCATTGGATTTGCAAAGTGCAATACATTTAGAAACCGAATTTACAATGAAACAAACATTGATCCTAGTTTTGCAGCATCTTTAAGAAAGACATGTCCTAGAAAAGGCGGAGACAGCAATTTATCACCACTTGATGCCACTCCTACAAAAGTTGACACAACATATTATAGAGATTTGATATACAAAAAGGGTCTTCTTCATTCTGATCAACAATTGTTTGAGGGAAAAGGTAGAGAAAGTGACAAATTGGTGCAACTTTATAGTAAAAGTCCTTTGGCTTTTGCTAGAGATTTTAAGAGTTCTTTGATCAAGATGGGGAACATGAAGCCTCTTACCGGGACACAGGGCGAGATCCGAATCAATTGCAGAAGGGTCAGATAA 960 0.3948 MTSSQIFVMVTLASLLISSNALLTPHFYDKVCPQALPVIKSVVKEAILKEKRIGASLLRLHFHDCFVNGCDGSVLLDDTKNFTGEKTALPNINSIRGFSVIDEIKAAVDKACKRPVVSCADILAIAARDSVAILGGPQLFYNVLLGRRDARTASKSAANTNLPPPTFSFSQLISNFKSHGLDVKDLVALSGGHTIGFAKCNTFRNRIYNETNIDPSFAASLRKTCPRKGGDSNLSPLDATPTKVDTTYYRDLIYKKGLLHSDQQLFEGKGRESDKLVQLYSKSPLAFARDFKSSLIKMGNMKPLTGTQGEIRINCRRVR 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01461 319 SUPERFAMILY Heme-dependent peroxidases 23 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa1g01461 319 Gene3D Peroxidase, domain 2 163 298 - -
Vifa1g01461 319 PANTHER PEROXIDASE 72-RELATED 20 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01461 319 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g01461 319 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g01461 319 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g01461 319 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g01461 319 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g01461 319 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Vifa1g01461 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Vifa1g01461 319 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01461 319 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01461 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01461 319 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01461 319 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01461 319 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01461 319 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01461 319 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01461 319 FunFam Peroxidase 26 170 - -
Vifa1g01461 319 Gene3D - 26 316 - -
Vifa1g01461 319 Pfam Peroxidase 40 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g01461 319 ProSiteProfiles Plant heme peroxidase family profile. 22 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g01461 319 FunFam Peroxidase 163 298 - -
Vifa1g01461 319 CDD secretory_peroxidase 23 318 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01461 Vifa-Chr1 238903971 238907932 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01461 21 318 Peroxidase AT5G05340 58.140 1.28e-124 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01461 K00430 - gmx:100811170 528.48