Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01455 ATGGATTCTCGTATCCAATTTTATGTTGTGACTTTCATGGTCACTTTGGCAACAGTTTTGAGTCCTACCGTTGCAAAGCTGACTCCTAATTATTATGACAGAATTTGTCCTAAGGCATTGCCAATCATAAAGTTAGCTGTTAAGCAAGCAATTTATCGTGAGCCACGCATTGGAGCTTCATTATTGCGTTTGCATTTCCACGATTGCTTTGTTAACGGTTGTGATGGATCAGTTCTTCTAGATGACACTCCTACCTTCCGTGGTGAGAAGACTGCATTTCCAAATATCAATTCAATTAGAGGTTTTGAACTTGTTGATCAAATTAAAGCTGCAGTTATCAAAGCTTGCAGACGTGATGTTGTATCATGCGCAGATATTTTAGCCATTGCGGCTCGAGATTCTGTAGCCATATTGGGTGGTAACCAATATTGGTACCAAGTGTTGCTAGGAAGAAGAGATGCAACAACTGCAAGCTGGGATGCTGCAAATGCAAATCTTCCACCTCCATTTTTCAATTTCTCACAACTCATCACAAATTTCAATTCTCATGGCCTAAACCTTAAAGACTTAGTTGTTCTATCTGGTGGCCACACAATTGGACTTGCCAGATGCACTACTTTTAGAGACAGAATCTTCAATGACACCAACATAGACACCACTTTTGCAGCCAATTTACAGAAAACATGTCCTCGAATAGGAGGCGACAACAGCTTAGCACCATTTGATTCTACTCCAAAAAAAGTTGACACAGCATACTACAAGGCTTTGTTGTACAAAAACGGTCTCCTTCATTCTGATCAAGAGCTTTTCAAAGGTGATGGTTCTGAAAGTGATAAATTGGTGCTGAAGTATAGCAAAGACTCCTACGCTTTTGCTAAGGATTTTGGAGTTTCTATGATCAAGATGGGTAACTTGAAGCCTCTTACTGGGAAAAAGGGTGAGATAAGGTGCAATTGCAGAAAAGTCAACTACTACTGA 978 0.3998 MDSRIQFYVVTFMVTLATVLSPTVAKLTPNYYDRICPKALPIIKLAVKQAIYREPRIGASLLRLHFHDCFVNGCDGSVLLDDTPTFRGEKTAFPNINSIRGFELVDQIKAAVIKACRRDVVSCADILAIAARDSVAILGGNQYWYQVLLGRRDATTASWDAANANLPPPFFNFSQLITNFNSHGLNLKDLVVLSGGHTIGLARCTTFRDRIFNDTNIDTTFAANLQKTCPRIGGDNSLAPFDSTPKKVDTAYYKALLYKNGLLHSDQELFKGDGSESDKLVLKYSKDSYAFAKDFGVSMIKMGNLKPLTGKKGEIRCNCRKVNYY 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01455 325 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g01455 325 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g01455 325 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g01455 325 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g01455 325 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g01455 325 PANTHER PEROXIDASE 72-RELATED 25 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01455 325 FunFam Peroxidase 167 302 - -
Vifa1g01455 325 FunFam Peroxidase 30 171 - -
Vifa1g01455 325 SUPERFAMILY Heme-dependent peroxidases 27 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa1g01455 325 CDD secretory_peroxidase 26 322 IPR033905 GO:0004601|GO:0042744
Vifa1g01455 325 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Vifa1g01455 325 ProSiteProfiles Plant heme peroxidase family profile. 26 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g01455 325 Pfam Peroxidase 46 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g01455 325 Gene3D - 30 320 - -
Vifa1g01455 325 Gene3D Peroxidase, domain 2 167 302 - -
Vifa1g01455 325 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01455 325 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01455 325 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01455 325 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01455 325 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01455 325 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01455 325 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01455 325 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g01455 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01455 Vifa-Chr1 238509166 238510329 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01455 25 323 Peroxidase AT5G05340 55.298 1.88e-113 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01455 K00430 - gmx:100810852 493.812