Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01444 ATGGAATTCCAAAACAAAGAGAACATTGGTTCCGATTTGCTCAAAGCACAAAGTCACATATGGAATCATATTTTCAACTTCATCAATTCCATGTCACTTAAATGTGTTGTTGATTTAGGTATACCTGATATCATACACAACTATGGCCAACCCATGTCACTTTCAAAACTCATTTCTTCACTACCAATTGATCATTCGAAACAACCTTACATCTATCGCTTGATGCGAATCATGACTCATTCTGGCTTCTTCTCTCAACAAAATGTTACCGATAATGAGTTAGAAATCGAGTATATGCTAACGGATGTATCTAGATTATTACTTAAGGGTAATCCGATGAGTGTGACACCGTTTGTGCAGGCGATGCTTGATCCAGTTTTGACAAATCCATTTCATCAATTGTCCACTTGGTTTAAAAATGAGGATTCTTCAGCATTTGAAACTACCCATGGGAAGCTTTTTTGGGAATATATTGCTCATGACCCAATATTTAACCGTTTATTCAATGAGTCCATGGCAAGTGATGCTCGATTAGTGAGTAATCTATTGATTGAGAATTGTAAGGATGTGTTCAATGGATTGGAGTCATTAGTTGATGTTGGAGGGGGCACAGGGACTATGGCAAAGGCTCTTGCCAAATCGTTCCCACAATTAGAATGCATTGTGTTTGATCTCCCACATGTTGTTGATGGCTTGCAAGGAAGTCATAACCTAAACTATGTTGGTGGAGATATGTTTCAAGAAATTCCTCAAACAAATGCCATTTTATTAAAGTGGATCTTACATTCTTTAAATGACGAGAAATGTGTGAAGATATTGAAGAAATGCAAGGAATCGCTGAAAAAGAAAGGTAAAGAAGGGAAGGTGATTATCATAGATATGGTGTTGGAAAATGAAAATGAAAATATTAATGAAGTAGTTGAAACACAACTCTTCTTTGATATGTTGATGATGGTAAATCCCGCTGGAAAAGAGAGAAATAAGAAAGAATGGATTAAGTTGATTTTATCGGCTGGTTTTAGTGATTATAAAATTACCCCAATTTTAGGTTTAAGATCCATAATTGAGGTCTATCCGTAA 1080 0.3583 MEFQNKENIGSDLLKAQSHIWNHIFNFINSMSLKCVVDLGIPDIIHNYGQPMSLSKLISSLPIDHSKQPYIYRLMRIMTHSGFFSQQNVTDNELEIEYMLTDVSRLLLKGNPMSVTPFVQAMLDPVLTNPFHQLSTWFKNEDSSAFETTHGKLFWEYIAHDPIFNRLFNESMASDARLVSNLLIENCKDVFNGLESLVDVGGGTGTMAKALAKSFPQLECIVFDLPHVVDGLQGSHNLNYVGGDMFQEIPQTNAILLKWILHSLNDEKCVKILKKCKESLKKKGKEGKVIIIDMVLENENENINEVVETQLFFDMLMMVNPAGKERNKKEWIKLILSAGFSDYKITPILGLRSIIEVYP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01444 359 FunFam Coniferyl alcohol 9-O-methyltransferase 3 107 - -
Vifa1g01444 359 FunFam O-methyltransferase ZRP4 109 359 - -
Vifa1g01444 359 Gene3D - 2 107 IPR036388 -
Vifa1g01444 359 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
Vifa1g01444 359 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Vifa1g01444 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 359 IPR016461 GO:0008168
Vifa1g01444 359 PIRSF O-mtase 1 359 IPR016461 GO:0008168
Vifa1g01444 359 Gene3D Vaccinia Virus protein VP39 108 359 IPR029063 -
Vifa1g01444 359 Pfam O-methyltransferase domain 131 341 IPR001077 GO:0008171
Vifa1g01444 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 358 IPR029063 -
Vifa1g01444 359 PANTHER O-METHYLTRANSFERASE 14 344 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01444 Vifa-Chr1 236814902 236837807 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01444 31 345 Monolignol Biosynthesis Gene Families AT5G54160 33.231 6.42e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01444 - K16040 psat:127122247 496.123