Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01441 ATGAGTGTGACACCGTTTGTGCAGGCAATGCTTGATCCAGTTTTGACAAATCCGTTTCATCAATTGTCCACTTGGTTTAAAAACGAAGATCCTACAGCATTTGAAACAACACATGGGAGGGTTTTGTGGGATTATACTGCACGTGATCCCAAGTTTAACAACTTGTTTAATGAGTCCATGGCAAGTGATGCTCGATTTGTAACTAATTTGTTGCTTGAGAAGGGTAGGGAAGTGTTCGATAAATTGGAGTCATTGGTTGATGTTGGAGGAGGCACAGGGACCATGGCAAAGGCTCTTGCCAATTCTTTTCCACAATTAGAGTGCATTGTATTTGATCTCCCACATGTTGTTGATGGTTTGCAAGGAAGTGATAACCTAAACTATGTTGGTGGAAACATGTTTCAAGAAATTCCTCCGGCAGACGCTATTTTATTGAAGTGGATATTGCATGATTGGAATGATGAAGAATGTGTGAAGATATTGAAAAAGTGCAAGGAATCATTGAAGAAGAAAGGTAAAGAAGGAAAAGTGATTATCATAGAGATGGTGTTAGACAATGAGAAGAAAAATATTAATGAATCAGTTGAAACTCAACTCTTGTTTGATATGTTGATGATGGTATTACTCACTGGAAAAGAGCGAAACAAGAAAGAATGGATTAAGTTGATTTCTTCTGCTGGTTTTAGTGACTATAAGATAACTCCAATTTTAGGTTTAAGGTCTGTTATTGAAATCTATCCATAA 744 0.371 MSVTPFVQAMLDPVLTNPFHQLSTWFKNEDPTAFETTHGRVLWDYTARDPKFNNLFNESMASDARFVTNLLLEKGREVFDKLESLVDVGGGTGTMAKALANSFPQLECIVFDLPHVVDGLQGSDNLNYVGGNMFQEIPPADAILLKWILHDWNDEECVKILKKCKESLKKKGKEGKVIIIEMVLDNEKKNINESVETQLLFDMLMMVLLTGKERNKKEWIKLISSAGFSDYKITPILGLRSVIEIYP 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01441 247 Pfam O-methyltransferase domain 19 229 IPR001077 GO:0008171
Vifa1g01441 247 PANTHER O-METHYLTRANSFERASE 17 232 IPR016461 GO:0008168
Vifa1g01441 247 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 245 IPR029063 -
Vifa1g01441 247 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 247 IPR016461 GO:0008168
Vifa1g01441 247 Gene3D Vaccinia Virus protein VP39 1 247 IPR029063 -
Vifa1g01441 247 FunFam O-methyltransferase ZRP4 1 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01441 Vifa-Chr1 236618631 236619481 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01441 2 247 Monolignol Biosynthesis Gene Families AT1G51990 35.341 1.11e-45 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01441 - K16040 gmx:100781008 375.555