Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01432 ATGGCTGGAGAAGGTGGAGGAAGAAGCTTAACTGAAACTCCTACTTGGGCTGTTGCAGTTGTTTGCTTTGTTATACTTTTAATATCTATTGTCATTGAACACATCTTCCACTTCATCGGAAATTGGTTGAAGAAGAAACACAAAAGCGCGTTACATGAGTCGCTTGAAAAAATCAAATCAGAGTTAATGTTATTGGGGTTTATATCATTGCTACTAACAGTAGGAGAAGGTTTAATATCGAAGATATGTATATCCGAAAAGGTTGCAGCCACATGGCATCCATGTAGCAACAATGTACTTAAAGACAGAGATTCCGATGATGAATCCGGTGGCCGTCGAAGATTACTAGCGGATCCGCGACGTATATTGGCCGGTGGAGGAATTGATAAATGTGCGGAAAACGGAAAAGTAGCATTTGTGTCGGCCAGTGGAATTCATCAGCTACATATATTTATCTTTGTTTTGGCAGTTTTTCATGTTCTTTATTGCATACTTACTCTGGCTCTAGGTAGAGCAAAGATGAGAAGATGGAAAAGATGGGAAGAGGAAACCAAGACACTTGAGTACCAATTTACACATGATCCTGAAAGGTTTAGATTTGCTAATGAGACTTCATTTGGAAGAAGACACTTGAGATTTTGGACCAAAAATCCCATACTCATTTGGATTGTATGTTTCTTCAGGCAATTTGTAAGATCAGTTCCTGAAGTGGATTACTTAACTTTAAGGCATGGATTTATGATGGCACATTTGGCACCTTCAAGTCACCAGAAATTTGACTTTAGACAATATATTAAAAGATGTTTGGAAGAAGACTTCAAAGTTGTTGTAGAAATCAGTCCTCCACTTTGGTTCATTGCAGTGTTCTTCCTCCTATTCCATACTCATGGATGGTACTCTTATCTATGGCTACCATTTGTTCCTTTAATTATTGTTCTATTGGTTGGAACAAAGTTGCAAGTGATCATAACTCAAATGGGTCTAAGAATTTCAAAACAAGGAATGGTGGTAAAGGGTGAGCCAGTGGTGCAACCTGGGGATGATCTCTTTTGGTTTAACAAACCTAGACTTATTCTTTACCTTATTAATTTTGTACTCTTTCAGAATGCCTTTCAGCTTGCTTTCTTTTCATGGACTGCATTTCAATTTGGATTGAAATCATGTTACAATTCTCGTTCAGAGAATGTGGTGATTAGAATCTCTATGGGGATCATCGTTCAAATTCTTTGTAGCTACGTGACTCTTCCTCTCTATGCTCTTGTCACACAGATGGGTTCAACCATGAAGCCAACTATATTCAATGAAAGAGTAGCCACAGCTCTAAAGCATTGGCATCAGGATGCAAAGAAGAACATAAAGCAGAACCGTGGATCGGGCTTTCAAAGCCCAATATCAAGCAGGCCGGCCCACATTCTTCGTCATTGTCGCAGCGAAATTGACTTATCTCCAACAAGACTTGACTTTGAGACGTATCCTCCATATGAGTCTTATTCACCGTCACCTTCCAACTCTCACCACCACAAGGTTGAGACTAGTGCTGCTTCTCCGGGCTCGATTATTCTTCATGAAATGGAAATGGGCCATTTGGGCCGTGATGGACAACAAGAGATCGTTGAGCCCAATTGTGTTACTGTGGGCTTGGGCCAGCCTCAGTTTGTGGTTGATGTCCAACATAGTGACGAATTTTCATTTTCCAAAATGGCAACAAATCAATTAGAATGA 1722 0.3995 MAGEGGGRSLTETPTWAVAVVCFVILLISIVIEHIFHFIGNWLKKKHKSALHESLEKIKSELMLLGFISLLLTVGEGLISKICISEKVAATWHPCSNNVLKDRDSDDESGGRRRLLADPRRILAGGGIDKCAENGKVAFVSASGIHQLHIFIFVLAVFHVLYCILTLALGRAKMRRWKRWEEETKTLEYQFTHDPERFRFANETSFGRRHLRFWTKNPILIWIVCFFRQFVRSVPEVDYLTLRHGFMMAHLAPSSHQKFDFRQYIKRCLEEDFKVVVEISPPLWFIAVFFLLFHTHGWYSYLWLPFVPLIIVLLVGTKLQVIITQMGLRISKQGMVVKGEPVVQPGDDLFWFNKPRLILYLINFVLFQNAFQLAFFSWTAFQFGLKSCYNSRSENVVIRISMGIIVQILCSYVTLPLYALVTQMGSTMKPTIFNERVATALKHWHQDAKKNIKQNRGSGFQSPISSRPAHILRHCRSEIDLSPTRLDFETYPPYESYSPSPSNSHHHKVETSAASPGSIILHEMEMGHLGRDGQQEIVEPNCVTVGLGQPQFVVDVQHSDEFSFSKMATNQLE 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01432 573 MobiDBLite consensus disorder prediction 495 514 - -
Vifa1g01432 573 PANTHER MLO-LIKE PROTEIN 1 6 508 IPR004326 GO:0006952|GO:0016020
Vifa1g01432 573 Pfam Mlo family 8 471 IPR004326 GO:0006952|GO:0016020
Vifa1g01432 573 MobiDBLite consensus disorder prediction 495 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01432 Vifa-Chr1 234051475 234054505 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01432 8 469 MLO family AT2G39200 64.255 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01432 K08472 - gmx:100776714 793.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g01432 1 234051475 234054505 Vifa1g01432 1 234051475 234054505 ECH