Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01402 ATGGCTGATAGTACAGTAAACTCGACCATTGACACCATTTTAACAAATGGAACGATATGGATTTGTGAACCGATATCTAAGAATCCAAGGTTAAGAGGGATTTTCTTTTCAGATAATCCATTTAATTACACATTGCCGGTTCTTTTTATACAAATCTCTTTGGTTTCTAGCTTGACTGGAACTTTACAATTCTTGCTTGAACCTATTGGAGAGACAAGATTCTTTTCACAAATGCTGGCTGGCATGATGCTAGGACCATCAGTTATAGGACAAAGTGCTTTCCTACAAAAGTGGCTATTCCCAACAAAAACATTCTACATAAGTGAGACAATTGCTTTTTTTGGCGGCATGATATTTATCTTTTTAATTGGAGTAAAAATTGATCTAAGTATTGTTGTAAGATCGGGAAAAAAAGCTTGGGCAATTGGAGTATTATCATTTCTCATTCCATTATTATTATGTTCTATTGTTTATTGTTTTACAAGAAAAACATTACCCCATGATCATCCTCTCTATAAGTCTTTATTTTCAATGACACTCATCTTCTCAAGTAGTTCATTCCATGTGACCGCAATCCACTTAGCAGATTTAAAGCTATCAAACTCCGAAATGGGACGATTAGCGATATCTTCATCCATGGTCAGTGGAACCATTTCGTTGGTGTTGGTTACCGCAATGGTATCCCAAGGAAATACTTTTTCCTTGAAAGATAAGACTTTGTTCTTGATGGGCATGAGTTTACTTGTTATGATTACTTTCATATTATATGTTTTACGTCCCATAATGTTTTGGATGATAAGACAAACACCTGAAGGGAGACAAATGAAAGAAGCACATATAATATCAGTGTTTTTAATGCTAATGGGTTGTGCGCTTTTTAGCGAAATTATTGGACAACATGTTCTGGTTTTACCTATCATTTTTGGTATAGCTGTACCTGAAGGTCCTCCATTAGGATCAGCATTGACAGATAGATTGGATACATTGATTTCGTCAATTTTTTTGCCGTTGTATTTTGTTTATAGTGGTTCTAGATTCAATATTTTTATAATTGATGGCCATACCTTTGTGATTGTTCAACTTCTTGCGATTGTTGCATTCCTTGGGAAGGTTGTAGGAACTATATTGCCTTCAATTTTTTGGAAGATGCCAATTGCCGATGTTATAGCTTTAGGACTACTTATGAGTGCTCAAGGCATCACACATTTGCTTTACTTGCAAACAGGTCTAAATATTAAGATGTTAGATGAACAATCATATGGCAATGCATTGATAGCATTACTATGGTTAACCGGAGTCACCACTCCCATTGTGAAATTCTTATACGATCCGTCTAAGAGGTACTTATCTTTAAATAGAAAAAGAACCATTGAACAATCAACTCAAGATATAGAACTACATCTCATGACCTGTATACATACTCAAGAAACCACACCTTCTATAATCAATATTCTTGAAATGTCAAACCCTTCATTGGAAAATCCTATTTGTCTCTATGTTCTACATCTTATTCAACTAAGAGGAAGATCAACCCCAGTTTTCATAGATCATCAATCGACTAGCAAGAAGAATCCTCTGCACAAGAATTACTCAGAGCATATAATAAACGCGTTTCGGTCCTACGAGAAACAAAAATCCAACAATGTTGTTGTGAAACTCTACACGTCGATTTCTCCTTATGAGACATTGCATGATGAAATATGTATGCAGGTTGCTGAAAAGAGAGTTTGTTTATTGATTGTGCCTTTTCATAGACAATGGAAATCAAATGGGACAACAGAATTCGAACACTTGATAAGGGCATTAAATCGCCAGCTTCTCAGGACGGCACCTTGTTCTGTTGGGATTCTAATCGAGCGCGGTACTTTGAATATACGCAATCCTCTAATAAATGTAACATTTTATAATGTTGGAATAGTCTTTATAGAAGGAAACGATGACCGTGAAGCCTTAGCCTATGCGATACGGATGGCAAACAACCCGATTGTAAGGATCACATTGGTTCGACTAATGGAGCCTCAGAAGAAAAATAAGAACTTGATAAATAGGGATCCAGATGGGGATTTGATTCATAGGTTTAAAGTGGAATGCATCCAAATTAAACGACATGATTATAAAGAGGAAGTAGTAAGAGATAGTGTTGAAATGATAAATGTTCTAAGGTCACTTGAAGGTTGTTTTGATTTAACTTTGGTTGGTAGAAGACATGCAAGTGAGTCAAGTTTGTTTAGTGGATTAGCTAATTGGTATGAGTATCCTGAACTTGGACCTATTGGTGACTTGTTAGTTTCTTCCAATTCTACTTTTGATGGTTCTGTTATGGTGATTCAACAACAAAAGAGATCAGGAATTGGTTATGATTTGCGTTTAGATTATGGTGTTTTGCCAAAGCAAGAAAAAGTAACCATTAATGATAGAAAGGTGTGGCCAACTGTTTAA 2439 0.3567 MADSTVNSTIDTILTNGTIWICEPISKNPRLRGIFFSDNPFNYTLPVLFIQISLVSSLTGTLQFLLEPIGETRFFSQMLAGMMLGPSVIGQSAFLQKWLFPTKTFYISETIAFFGGMIFIFLIGVKIDLSIVVRSGKKAWAIGVLSFLIPLLLCSIVYCFTRKTLPHDHPLYKSLFSMTLIFSSSSFHVTAIHLADLKLSNSEMGRLAISSSMVSGTISLVLVTAMVSQGNTFSLKDKTLFLMGMSLLVMITFILYVLRPIMFWMIRQTPEGRQMKEAHIISVFLMLMGCALFSEIIGQHVLVLPIIFGIAVPEGPPLGSALTDRLDTLISSIFLPLYFVYSGSRFNIFIIDGHTFVIVQLLAIVAFLGKVVGTILPSIFWKMPIADVIALGLLMSAQGITHLLYLQTGLNIKMLDEQSYGNALIALLWLTGVTTPIVKFLYDPSKRYLSLNRKRTIEQSTQDIELHLMTCIHTQETTPSIINILEMSNPSLENPICLYVLHLIQLRGRSTPVFIDHQSTSKKNPLHKNYSEHIINAFRSYEKQKSNNVVVKLYTSISPYETLHDEICMQVAEKRVCLLIVPFHRQWKSNGTTEFEHLIRALNRQLLRTAPCSVGILIERGTLNIRNPLINVTFYNVGIVFIEGNDDREALAYAIRMANNPIVRITLVRLMEPQKKNKNLINRDPDGDLIHRFKVECIQIKRHDYKEEVVRDSVEMINVLRSLEGCFDLTLVGRRHASESSLFSGLANWYEYPELGPIGDLLVSSNSTFDGSVMVIQQQKRSGIGYDLRLDYGVLPKQEKVTINDRKVWPTV 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01402 812 Gene3D - 47 449 IPR038770 -
Vifa1g01402 812 PANTHER CATION/H + ANTIPORTER 31 781 - -
Vifa1g01402 812 Pfam Sodium/hydrogen exchanger family 54 438 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01402 Vifa-Chr1 228035005 228038729 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01402 33 778 Antiporter Super Family AT2G13620 35.631 1.44e-157 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01402 K26731 - mtr:11413669 998.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g01402 1 228035005 228038729 Vifa1g01402 1 228035005 228038729 ECH