Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g01399 | ATGCCTTCATTATCAAATCTCCATCTTCCAATCTTCATATTTTCTTCATCACCTAGTGAAAAAGAAAACAAGTGTCTCCCCCATCACGAATGTCAAACAGTCGGTGAAGACGACAACCATTCCAGCGGTGGCGCAGCCGCTCAGAAACTGAACTCTTATGGCGACGGAGCTACCATTGAGGTTGTCAGGTGGCCTAGAGGATGTCCCCCTGGATCTAAAAACAGGCCTAGACATCCTGTAATCATAACACGCAATCCTGAACCTTCTATGAGTCCTTTTATTCTAGAAGTTTCTGCAGGAAATGACTTCGTTCAAGCGGTTGCTGAGTTTAGTCATCGTAGAAACATTGGTTTATGTGTTCTAACTGCTTCATGA | 375 | 0.44 | MPSLSNLHLPIFIFSSSPSEKENKCLPHHECQTVGEDDNHSSGGAAAQKLNSYGDGATIEVVRWPRGCPPGSKNRPRHPVIITRNPEPSMSPFILEVSAGNDFVQAVAEFSHRRNIGLCVLTAS | 124 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g01399 | 124 | ProSiteProfiles | PPC domain profile profile. | 87 | 124 | IPR005175 | - | |
Vifa1g01399 | 124 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 40 | 124 | IPR014476 | GO:0003680 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g01399 | Vifa-Chr1 | 227315105 | 227316547 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g01399 | 55 | 124 | AT-hook Motif Nuclear Localized (AHL) Family | AT5G49700 | 58.571 | 2.23e-24 | 92.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g01399 | - | - | adu:107460948 | 130.954 |