Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01398 ATGGATCCCAATAATCATTTTAACACTCAAAATTCTGCTAATTTTCCATTTAACCAAAATCCCAACAATTTTCCAAATCCCAACAATTATCAAAATCCCAACTATTATCAAAATCCAAATCAATTTTCCAACCAACATCCTCAAAACATACCTAATTTTGGTTTTCCACCAAATTTCAACCAGACATCCTCTGTTCCAAACTTTCAAACATATTATGGATCTATGCCGAGAAATCCATCTCAAACACCCCCGTTTAATGGTTATGTGACAATGGCGAATGCAAATTTTCCAAGTGGTGGCGTATCTGAATTTCCCGAGTTTTCAACACAACTAACTATTGGTGGCATGATTGTTTCTAATGAAGTCGGTCCGAATTCAGAGGATTCAACTCCTAAGAGCAGGAAAACTCAGCAACCAGCATGGAACACTGAACAAAATTTGGTTCTAATTAGTGGGTGGATTAAATTTGGAACAAGCAGTGTTGTCGGGAGAAACCAGAAAGGTGAAACATATTGGGGTAAAATTGCTGAGTATTGTAATGAGCATTGCTCATTCGATCCTCCGCGTGATGGACCTGCATGCCGAAACCGTTTTAATTATATGAACAAAGTGTTGGGTAAATGGATTGGCGCTTATGATGGCGCTAAGCGTATGCAAGGAAGTGGTTGGTCGGAGAATGATGTTTTGGCAAAAGCGCAGGAATTATATGCATGTGGGAAGAATGTTAAATTCACTTTAATGGAAGAATGGCACGCTCTCCGTGATCAACCACGTTATGGTAGTCAAGTAGGAGGAAATATTGGCTCAGGAAGTAGTGGATCTAAGAGATCTCACGAGAGTGATGCATGTGGCTCAAACACTGTAGAATCCAGTGCTCGTCCTATAGGAAGGGAGGCAGCTAAAAAAAAGGGTAAAAAGAAAAGCAAGGAATATGCCTCGGAGGTGGTGGACAAAGAATGGGCTGAATACAAAGAATTCAAGACGAAAGAGCTTGAACGATTGGACAACATAGCGTTGATGCAACAGCAGGCTAACAATATAGCCTTGGAGAAGACTAAAATCAAGAAAATGAAGATGTATCTAAAGCTAACTTCCGAAGAGCATCTAGATGACCGGAAGAACCAGCTGTTGAAAAAGTTGGAGGCAGAACTGTTTGATAATTAA 1164 0.3995 MDPNNHFNTQNSANFPFNQNPNNFPNPNNYQNPNYYQNPNQFSNQHPQNIPNFGFPPNFNQTSSVPNFQTYYGSMPRNPSQTPPFNGYVTMANANFPSGGVSEFPEFSTQLTIGGMIVSNEVGPNSEDSTPKSRKTQQPAWNTEQNLVLISGWIKFGTSSVVGRNQKGETYWGKIAEYCNEHCSFDPPRDGPACRNRFNYMNKVLGKWIGAYDGAKRMQGSGWSENDVLAKAQELYACGKNVKFTLMEEWHALRDQPRYGSQVGGNIGSGSSGSKRSHESDACGSNTVESSARPIGREAAKKKGKKKSKEYASEVVDKEWAEYKEFKTKELERLDNIALMQQQANNIALEKTKIKKMKMYLKLTSEEHLDDRKNQLLKKLEAELFDN 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01398 387 MobiDBLite consensus disorder prediction 122 141 - -
Vifa1g01398 387 MobiDBLite consensus disorder prediction 119 141 - -
Vifa1g01398 387 MobiDBLite consensus disorder prediction 261 308 - -
Vifa1g01398 387 PANTHER - 112 384 - -
Vifa1g01398 387 MobiDBLite consensus disorder prediction 1 27 - -
Vifa1g01398 387 MobiDBLite consensus disorder prediction 262 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01398 Vifa-Chr1 227310922 227312085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01398 85 367 Glutathione S-transferase Gene Family AT5G41240 27.778 3.50e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01398 - - tpra:123885584 481.1