Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01383 ATGATTTTGTATGCAAATATATGGAAGTCATCTTCAAGTCTCCGATTCAAAGCTCATACAGCTTTCCTGGTGCTAACAATCACTTCTGTCTATTCATTCTTCTTTGACAAAGTGGTGAATGGGAAACCAGATGCATATAGTCTCGTTTCATGTGCTTCCTTTGCTATCATGTCACTCAGTTTGTCACGGCGAACTCATTGCGGAGTTGAAATTGATCTTCTCTACTTCTTCCTCGGATGTCTAATTGTGCAGCTCATGAAGATTAGCTTGCAGTTACTCATTCTTGGAGCAGGTTTCAGCTACTCCCTTATTATTCTTCGTTCTTCACTCTCTTCAACAGATGATGGAATAGAAAACGAGTATTTTGACCCGCAAGGTGAAAATTCACTTGTCCTTGAAATGGATTCATTACTACTGGAACAGTTTAAAACTTGTATGAAGGGAATTGAAGAGGAGAATTTGAATCTCGTAGACAGGCTTATGGAGCTCGTGAAGGAATACAATCTAGATAAGAGTGAATTACATTTACTCGGTAAGTCTGATTATGTAATGGATTCTCTGTCATCAAGAAAGATCCATAATCTTAATGAAACAGTGAAGTTGATGGTAGCAGCTGGTTATAAGAAAGAGTGCTATGATGTGTATAGCAGTTGGCGCAAGGTATTCTTGAAGGTGTGTCTCAAAAACGAAATATTTGGGTTGCCAACGGAAAACATCAATTCCATCCATGAGTATGAAAGAGAGAAATATTTAGATACTATGTTTGATAGATGGATGACTGCTTTGGATGTAGCTATGATAATCTTGTTTCCCATTGAACAGAAACTCTGCAATCGTGTCTTCTTGGGGTTTTCCTCGGCAGCTTCTAGTTGCTTCTTTGAGGTTTGCAAAGAAGCAACGTCTCAGCTGCTGTGTTTTGCAGATACAATTGCTTCTGGGAGCCCTACAAAATGGCGTTTGTTCAAAATGCTTCAAATATTCGGGCATTTGGGTAATCATATTCCAAGATTCCAATCTCTTTTCTTGGATTCGACTTTACTGAACGAAGCAATCGCACAAAGGAAACTGTTCTGA 1074 0.3892 MILYANIWKSSSSLRFKAHTAFLVLTITSVYSFFFDKVVNGKPDAYSLVSCASFAIMSLSLSRRTHCGVEIDLLYFFLGCLIVQLMKISLQLLILGAGFSYSLIILRSSLSSTDDGIENEYFDPQGENSLVLEMDSLLLEQFKTCMKGIEEENLNLVDRLMELVKEYNLDKSELHLLGKSDYVMDSLSSRKIHNLNETVKLMVAAGYKKECYDVYSSWRKVFLKVCLKNEIFGLPTENINSIHEYEREKYLDTMFDRWMTALDVAMIILFPIEQKLCNRVFLGFSSAASSCFFEVCKEATSQLLCFADTIASGSPTKWRLFKMLQIFGHLGNHIPRFQSLFLDSTLLNEAIAQRKLF 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01383 357 Coils Coil 146 166 - -
Vifa1g01383 357 PANTHER EXOCYST COMPLEX PROTEIN EXO70 108 350 IPR004140 GO:0000145|GO:0006887
Vifa1g01383 357 Gene3D Exocyst complex component Exo70 124 355 - -
Vifa1g01383 357 SUPERFAMILY Cullin repeat-like 143 350 IPR016159 -
Vifa1g01383 357 Pfam Exo70 exocyst complex subunit 257 345 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01383 Vifa-Chr1 225258820 225259969 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01383 181 351 EXO70 exocyst subunit family AT5G58430 44.828 4.32e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01383 - - mtr:11426486 396.741