Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01372 ATGAACCAAAAAATGTCAACTCTTGTTATTTTCCCTTTAGCTCTCTTGCTATTCATCTTCTTGTTCAAAAAACACAAAATATCATCTAAGAAACCAACACTTCCACCCGGTCCCAAAGGCCTTCCTTTCATTGGAAACTTACACCAACTTGAAAGTTCATCTCTAGGTCTAAACTTCCATGAACTCTCAAAAAAATATGGTTCTTTAGTTTTCCTCAAACTTGGTTCAAGGCCAACACTTGTTGTTTCTTCAGCTAAAATGGCTAAACTAGTTATGAAAACACATGACATCGATTTCTGTAATAGACCCGCTTTAACCAGTCTTATGAAACTCTCTTATGACGGATTAGATCAATTCTTTGCACCATATAGAGAATATTGGAGACACACCAAAAAAATCTCATTCATCCAATTTCTTAGTGTCAAAAGAATAGCAATGTATTATTCAGTTAGAAAATACGAGGTGACTCAAATGATGAAGAGGATATCAGAACAATATGTGCCTTCCAACAAACCTGTCAACCTGCAAAGTCTTCTTATGTGTCATGCAAGCGCGATCGTTTGTAGGACAGCGTTCGGGAGAAGGTTTGAAGAGGAAGGAACCGAGCGAAGCATGTTTCAAGATCCGCTTAGAGAAGTGCAGGCATTGATGATTGCATTCTTTTACACAGATTATTTGCCTTTTCTTGGAGGGATTATTGATAAGGTTACTGGAATGATGGCCCGTCTTGAGAAATTGGCTAAGTTTTTGGATGGATTTTATCAGAGTGTTGTTGATGAACATCTTGATCCTGAAAGGCAGAAGTTGCCTCCACATGAAAAGGATGTTGTTGATGCTTTGATTGATTTGAAGAATGATCCTTACTGCTCAATGGATCTCAGTGCCGAACACATCAAACCCTTGATCATGAATATGTTGTTGGCGGCAACAGACACTGTTTCGTCTGTGACAGTTTGGGCTATGACAGCGCTAATGAAGAATCCAAGAGTGATGAAAAAAGTACAAGAAGAGATTCGAAAAGCATATGAAGGGAAGGGATTTATAGAGGAAGAAGATGTTCAAAAGCTTCCATATCTCAAAGCAGTTATAAAAGAATCAATGAGATTATACCCAATATTGCCGATACTTTTCCCAAGAGAAACCATGAAAGAGATCGAAATCGAAGGGTACACAATTCCTAACAAGACATTAGTGTACGTGAGCGCTTGGGCGATTCATAGAGATCCAGAAACATGGGAGAATCCAGAAGAGTTTTATCCAGAGAGATTTCTAGGAAGTGATATAGATTTCAAAGGACAAGATTTCGAGCTGATTCCCTTTGGTTCGGGGCGAAGAATTTGCCCCGGCTTAAACATGGGGGTTGCTACTGTGGAGCTTTTCCTTGCTAATCTTTTATATTCGTTTGATTGGGAAATGCCCGAAGGAGTAAAGAGGGAAGATATAGATGTTGATGTTCATCCAGGACTTATTCAACACAAGAAAAATCCTCTGTGCCTTGTTGCTAAGACTAGAATTGCATGTGTGTGA 1527 0.3903 MNQKMSTLVIFPLALLLFIFLFKKHKISSKKPTLPPGPKGLPFIGNLHQLESSSLGLNFHELSKKYGSLVFLKLGSRPTLVVSSAKMAKLVMKTHDIDFCNRPALTSLMKLSYDGLDQFFAPYREYWRHTKKISFIQFLSVKRIAMYYSVRKYEVTQMMKRISEQYVPSNKPVNLQSLLMCHASAIVCRTAFGRRFEEEGTERSMFQDPLREVQALMIAFFYTDYLPFLGGIIDKVTGMMARLEKLAKFLDGFYQSVVDEHLDPERQKLPPHEKDVVDALIDLKNDPYCSMDLSAEHIKPLIMNMLLAATDTVSSVTVWAMTALMKNPRVMKKVQEEIRKAYEGKGFIEEEDVQKLPYLKAVIKESMRLYPILPILFPRETMKEIEIEGYTIPNKTLVYVSAWAIHRDPETWENPEEFYPERFLGSDIDFKGQDFELIPFGSGRRICPGLNMGVATVELFLANLLYSFDWEMPEGVKREDIDVDVHPGLIQHKKNPLCLVAKTRIACV 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01372 508 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01372 508 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01372 508 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01372 508 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01372 508 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01372 508 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01372 508 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01372 508 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01372 508 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01372 508 Pfam Cytochrome P450 35 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01372 508 FunFam Cytochrome P450 83B1 21 500 - -
Vifa1g01372 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Vifa1g01372 508 Gene3D Cytochrome P450 27 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01372 508 PANTHER CYTOCHROME P450 71B11-RELATED 18 502 - -
Vifa1g01372 508 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01372 508 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01372 508 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01372 508 CDD CYP71-like 65 497 - -
Vifa1g01372 508 SUPERFAMILY Cytochrome P450 35 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01372 Vifa-Chr1 222921707 222923348 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01372 13 505 Cytochrome P450 AT4G31500 44.758 1.10e-148 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01372 - - gmx:100803017 669.077