Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01371 ATGAACCAAAAAATGGCAACTCTTAAGTTGCCTCCACATGAAAAGGATGTTGTTGATGCTTTGATTGATTTGAAGAATGATCCTTACTGCTCAATGGATCTCAGTGCCGAACACATCAAACCCTTGATCATGAATATGTTGTTGGCGGCAACATACACTGTTTCGTCCGTGACAGTTTGGGCTATGACAACGCTAATGAAGAACCCAAGAGTGATGAAAAAAGTACAAGAAGAGGTTCGAAAAGCATATGAAGGGAAGGGATTTCTAGAGGAAGAAGATGTTCAAAAGCTTCCATGTCTCAAAGCAGTTATAAAAGAAACAATGAGATTATACCCAATATTGCCGATACTTTTCCCAAGAGAAACCATGAAAGAGATCAAAATCGAAGGGTACACAAATCCTGATAAGACATTAGTGTACGTGAGCGCTTGGGCGATTCATAGAGATCCAGAAACATGGGAGAATCCAGAAGAGTTTTATCCAGAGAGATTTCTAGGAAGTGATATAGATTTCAAAGGACAAGATTTCGAGCTGATTCCCTTTGGTTCGGGACGAAGAATTTGCCCCCGCTTAAACATGGGGGTTGCTACTGTGGAGCTTTTCCTTATTAATCTTTTATATTTGTTTGATTGGGAAATGCCTGAAGAAGTAAAGAGAATTGCATGTGTGTGA 672 0.3973 MNQKMATLKLPPHEKDVVDALIDLKNDPYCSMDLSAEHIKPLIMNMLLAATYTVSSVTVWAMTTLMKNPRVMKKVQEEVRKAYEGKGFLEEEDVQKLPCLKAVIKETMRLYPILPILFPRETMKEIKIEGYTNPDKTLVYVSAWAIHRDPETWENPEEFYPERFLGSDIDFKGQDFELIPFGSGRRICPRLNMGVATVELFLINLLYLFDWEMPEEVKRIACV 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01371 223 SUPERFAMILY Cytochrome P450 8 217 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01371 223 PRINTS E-class P450 group I signature 58 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01371 223 PRINTS E-class P450 group I signature 38 55 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01371 223 PRINTS E-class P450 group I signature 188 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01371 223 PRINTS E-class P450 group I signature 178 188 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01371 223 PRINTS E-class P450 group I signature 101 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01371 223 PRINTS E-class P450 group I signature 142 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01371 223 Pfam Cytochrome P450 4 218 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01371 223 PRINTS P450 superfamily signature 49 66 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01371 223 PRINTS P450 superfamily signature 179 188 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01371 223 PRINTS P450 superfamily signature 102 113 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01371 223 Gene3D Cytochrome P450 1 222 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01371 223 PANTHER CYTOCHROME P450 71B11-RELATED 13 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01371 Vifa-Chr1 222890329 222891975 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01371 16 215 Cytochrome P450 AT3G26210 54.187 3.57e-74 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01371 - - gmx:100803017 296.975