Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01364 ATGTCACCCCTTGTTATTTTCCCTTTTGCTCTCTTGCTATTCTTCTTGTTCAAAAAACACAAAATAACATCCAAGAAACCAACTCTTCCACCAGGACCTAAAGGCCTTCCTTTCATTGGAAACTTACACCAACTTGATAGTTCATCTCTTGGTATAAACTTCTATGAACTCTCAAAACAATATGGCTCTTTAATCTTCCTTAAACTTGGTTCAAGACCAACACTTGTTGTTTCATCTGCTAAAATGGCCAAACAAGTAATGAAAACACACGATATTGAATTCTGTAACCGACCCGCTTTAATCAGTCATATGAAACTCTCTTATAATGGATTAGATCAATTCTTTGCACCGTATAGAGAATATTGGAGACACACTAAAAAACTTTCCTTCATCCAATTTCTTAGTGTCAAAAGAGTAACAATGTATTCTTCAGTTAGAAAATATGAGGTGACTCAAATGATGAAGAAGATATCAGAACAATACGTGCCCTCTAATAAACCTGTCAACTTGCATGATCTTCTTACTTGTCTTACAAGCGCAATCGTTTGTAGGACAGCATTCGGGAGGAGGTTTGAAGAGGAAGGAATTGAGCGTAGCATGTTTCATGATTTGCTTAAAGAAGCGCAGGAAATGACGATTTCGTTCTTTTACACGGATTATTTGCCTTGTTTTGGAGGGATTATTGATAAATTTACTGGAATGATGGGTCGCCTTGAGAAAACATTCAAGTTTTTGGATGGATTTTTTCAGAGTATTGTTGATGAACATCTTGATCCTGAAAGGAAGAAGATGCGTCCACATGAAGAGGATGTTATTGATGCTTTGATTGAATTGAAGAATGATCCTTACTGTTCAATGGACCTCAAATCTGAACACATTAAACCCATGATCATGAATATGTTATTGGCGGGGACAGACACAATGGCGTCCGCGGTAGTTTGGGCTATGACCGCGTTAATGAAGGATACAAGAGTGATGCAAAAAGTACAAGAAGAAATTAGAAAAGTATTTGAAGGGAAAAGTTTTATAGATGAAGAAGATGTTCAAAAACTTCCATATCTAAGAGCGGTTATAAAAGAAACAATGAGATTATACCCTGCTTTGCCGATACTTCTACCAAGAGAAACCATGAAAGAGTGTGAAATTGAAGGAGATCCAGAAGCTTGGAAGAATCCAGAAGAGTTTTATCCAGAGAGATTTGTAGGAAGTGATATAGACTTTAAAGGACAAGATTTTGAGTTGATTCCATTTGGTTCAGGGCGAAGAGTTTGCCCCGGCTTAAACATGGGAGTTGCTACGGTGGACCTTTTACTTGTTAATCTTTTATATTTGTTTGATTGGGAAATGCCTGAAGGAGTAAAGAGGGAAGATATAGATCTTCATGGTCTTCCAGGACTTGTTAAACACAAGAAACACCCTCTGTGCCTTGTTGCAAAGACTAAAATTGTATGTGCATGA 1458 0.3731 MSPLVIFPFALLLFFLFKKHKITSKKPTLPPGPKGLPFIGNLHQLDSSSLGINFYELSKQYGSLIFLKLGSRPTLVVSSAKMAKQVMKTHDIEFCNRPALISHMKLSYNGLDQFFAPYREYWRHTKKLSFIQFLSVKRVTMYSSVRKYEVTQMMKKISEQYVPSNKPVNLHDLLTCLTSAIVCRTAFGRRFEEEGIERSMFHDLLKEAQEMTISFFYTDYLPCFGGIIDKFTGMMGRLEKTFKFLDGFFQSIVDEHLDPERKKMRPHEEDVIDALIELKNDPYCSMDLKSEHIKPMIMNMLLAGTDTMASAVVWAMTALMKDTRVMQKVQEEIRKVFEGKSFIDEEDVQKLPYLRAVIKETMRLYPALPILLPRETMKECEIEGDPEAWKNPEEFYPERFVGSDIDFKGQDFELIPFGSGRRVCPGLNMGVATVDLLLVNLLYLFDWEMPEGVKREDIDLHGLPGLVKHKKHPLCLVAKTKIVCA 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01364 485 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01364 485 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01364 485 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01364 485 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01364 485 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01364 485 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01364 485 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01364 485 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01364 485 PANTHER CYTOCHROME P450 71B11-RELATED 14 479 - -
Vifa1g01364 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Vifa1g01364 485 FunFam Cytochrome P450 83B1 16 477 - -
Vifa1g01364 485 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01364 485 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01364 485 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01364 485 Pfam Cytochrome P450 385 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01364 485 Pfam Cytochrome P450 30 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01364 485 CDD CYP71-like 60 474 - -
Vifa1g01364 485 Gene3D Cytochrome P450 22 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01364 485 SUPERFAMILY Cytochrome P450 30 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01364 Vifa-Chr1 221985403 221987002 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01364 10 482 Cytochrome P450 AT4G31500 42.713 1.22e-134 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01364 - - gmx:100803017 659.833