Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01362 ATGAACCAAAACATGTCACCCTTTGTTATTTTCCCTTTTGCTCTCTTCCTATTCTTCTTCTTGTTCAAAAAACACAAAACATCCAAGAATCCAACCCTTCCACCAGGTCCTAAAGGTCTTCCTTTCATTGGAAACTTACACCAACTTAATAGTTCATCCCTTGGTGTAAACTTCTATGAACTCTCAAAAAAATATGGCTCTTTAATCTTTCTTAAACTTGGCTCAAGACCAACACTTGTTGTCTCATCAGCCAAAATGGCCAAACAAGTATTGAAAACACACGACATCGAATTTTGTAACCGACCCTCTTTAATCAGTCATATGAAACTCTCTTACAATGGATTGGATCAAGTGTTTGCACCATATAGAGAATATTGGAGACACACCAAAAAACTTTCCTTCATCCAATTTCTTAGTGTCAAAAGAGTAACAATGTATTCTTCAGTTAGAAAAAATGAGGTGACTCAAATGATGAAGAAGATATCAGAACAATATGTCCCCTCTAACAAACTTGTGAACCTGCATAATCTTCTTTCGTGTCATACAAGTGCGATCGTTTGTAGGACAGCGTTCGGGCGAAGGTTCGAAGAGGATGGAACTGAGCGTAGCATGTTTCATGATTTGCTAAAAGAAGCACAGGAGTTGACGAGTATTGTTGATGAACATCTTGATCCTGAAAGGAAGAAGTTGCATCCACATGAAGAGGATGTTATTGATGCTTTGATTCATTTGAAGAATGATCCTTACTGCTCAATGGATCTCAAATCTGAACACATCAAACCTTTGATCATGAATATGTTGTTGGCGGGGACAGACACGATTGCGTCTGTGGTAGTTTGGGCTATGACTGCACTAATAAAAGATCCAAGAGTGATGCGGAAAGTACAAGAAGAGATTCGAAACGTATTTGGAGCGAAGGGTTTTATAGAGGAAGAAGATGTTCAAAAGCTTCCGTATCTCAAAGCAGTTATAAAAGAAACAATGAGATTATACCCATCATTACCGATACTTCTACCAAGAGAAACCATGAAAGAGTGCGAAATCGGAGGGTACAAAATTCCTGACAAGACGTTGGTGTTCGTGAATGCTTGGGCGATTCATAGAGATCCAGAAGCATGGAAGAATCCAGAAGAGTTTTATCCAGAGAGATTCATAGGAAGTGATATAGATTTTAAAGGACAAGATTTCGAGCTGATTCCGTTTGGTTCGGGGCGAAGAGTTTGTCCCGGCTTAAACATGGGGGTTGTTACTGTGGAGCTTTTACTTGCTAATCTTTTATATTTGTTTGATTGGGAAATGCCTGAAGGTGTAAAGAGGGACGATATAGATTTTGATAATCTTCCGGGACTTGTTCAACACAAGAAAAATCCTTTGTGCCTTGTTGCTAAGACTAGAATTACATGTGTGTGA 1410 0.3887 MNQNMSPFVIFPFALFLFFFLFKKHKTSKNPTLPPGPKGLPFIGNLHQLNSSSLGVNFYELSKKYGSLIFLKLGSRPTLVVSSAKMAKQVLKTHDIEFCNRPSLISHMKLSYNGLDQVFAPYREYWRHTKKLSFIQFLSVKRVTMYSSVRKNEVTQMMKKISEQYVPSNKLVNLHNLLSCHTSAIVCRTAFGRRFEEDGTERSMFHDLLKEAQELTSIVDEHLDPERKKLHPHEEDVIDALIHLKNDPYCSMDLKSEHIKPLIMNMLLAGTDTIASVVVWAMTALIKDPRVMRKVQEEIRNVFGAKGFIEEEDVQKLPYLKAVIKETMRLYPSLPILLPRETMKECEIGGYKIPDKTLVFVNAWAIHRDPEAWKNPEEFYPERFIGSDIDFKGQDFELIPFGSGRRVCPGLNMGVVTVELLLANLLYLFDWEMPEGVKRDDIDFDNLPGLVQHKKNPLCLVAKTRITCV 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01362 469 CDD CYP71-like 64 458 - -
Vifa1g01362 469 PRINTS P450 superfamily signature 399 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01362 469 PRINTS P450 superfamily signature 269 286 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01362 469 PRINTS P450 superfamily signature 322 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01362 469 SUPERFAMILY Cytochrome P450 34 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01362 469 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 401 410 IPR017972 GO:0005506|GO:0016705
Vifa1g01362 469 PRINTS E-class P450 group I signature 258 275 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01362 469 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01362 469 PRINTS E-class P450 group I signature 278 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01362 469 PRINTS E-class P450 group I signature 321 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01362 469 PRINTS E-class P450 group I signature 398 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01362 469 PRINTS E-class P450 group I signature 408 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01362 469 PRINTS E-class P450 group I signature 362 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01362 469 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01362 469 PANTHER CYTOCHROME P450 71B11-RELATED 215 463 - -
Vifa1g01362 469 FunFam Cytochrome P450 83B1 214 461 - -
Vifa1g01362 469 Gene3D Cytochrome P450 26 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01362 469 Pfam Cytochrome P450 210 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01362 469 Pfam Cytochrome P450 34 215 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01362 Vifa-Chr1 221423228 221424879 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01362 20 466 Cytochrome P450 AT4G31500 43.943 6.66e-139 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01362 - - gmx:100803017 652.129