Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g01353 | ATGAGTCACGCTAGTGCAGTTGGTGCCAAGGGGAAGAAGAAGGGTGGAACCTTCACCATTGACTGTGCTAAGCCAGTTGAAGACAAGATCATGGACATTGCTTCACTTGAGAAGTTTCTTCAAGAGAAGATCAAGGTTGGTGGCAAAACCGGTGCTCTTGGTGATTCTGTTACTATTGTCAGGGAAAAATCAAAGATAATTGTTACCTCTAATAGCAATTTCTCCAAAAGGTATTTGAAGTATTTGACCAAGAAGTACTTAAAAAAACATAATGTTAGAAACTGGCTCCGTATGATTGCTTCAAACAAAGATAGAAATATTTATGAGTTGAGGTACTTCAACATTGCAGAGAGAACGATTGAGAGATAA | 369 | 0.3848 | MSHASAVGAKGKKKGGTFTIDCAKPVEDKIMDIASLEKFLQEKIKVGGKTGALGDSVTIVREKSKIIVTSNSNFSKRYLKYLTKKYLKKHNVRNWLRMIASNKDRNIYELRYFNIAERTIER | 122 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g01353 | 122 | Gene3D | - | 5 | 122 | IPR038526 | - | |
Vifa1g01353 | 122 | PANTHER | 60S RIBOSOMAL PROTEIN L22 | 1 | 121 | IPR002671 | GO:0003735|GO:0005840|GO:0006412 | |
Vifa1g01353 | 122 | Pfam | Ribosomal L22e protein family | 16 | 118 | IPR002671 | GO:0003735|GO:0005840|GO:0006412 | |
Vifa1g01353 | 122 | FunFam | 60S ribosomal protein L22-2 | 5 | 122 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g01353 | Vifa-Chr1 | 219867321 | 219867689 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g01353 | 1 | 117 | Cytoplasmic Ribosomal Protein Gene Family | AT3G05560 | 81.197 | 3.26e-57 | 171 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g01353 | K02891 | - | gmx:100499952 | 189.504 |