Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01345 ATGTCGAAAGTAGTTTGCGTCACCGGCGGCAGTGGCTGCATCGGATCATGGCTCGTCCATCTCCTTCTCCGCCGTGGCTACACCGTTCACGCCACCGTCCAAAATCTCAGTGATGAGAACGAGACGAAGCATCTAGAAGCTCTCGAAGGAGCACAAACCAATCTCCGTCTCTTCCAGATCGATCTTCTCAACTACGACACGATCGTCGCCGCTGTACGCGGTTGCGATGGTGTTTTTCACCTTGCTTCGCCGTGCATTGTTGATAAAGTTCATGATCCTCAGAAGGAGCTTCTGGATCCTGCGATTAAAGGGACTGTGAATGTGCTCACCGCGGCTAAGGAAGCCGGGGTGAAGCGCGTGGTTATTACGTCGTCTATCTCGGCCATTACTCCTAGTCCTGATTGGCCTTCTGATGTTGTCAAGAGAGAGGATTGTTGGACTGATACTGAATACTGCAAAAATAAAGAGTTGTGGTATCCGTTGTCCAAGACACTGGCAGAGAAAGCTGCATGGGATTTTTCCAAAGCAAATGGTTTGGATGTTGTTGTGGTGAATCCCGGTACTGTGATGGGACCTGTTATTCCACCAAGGATTAATGCAAGCATGCTCATGCTTGTTCAACTTCTTGAAGGTTGCATTGAAACATATGAAGATTATTTTATGGGGTTGGTCCACTTCAAAGATGTAGCATTGGCGCATATTTTGGTATATGAGAACAAGGAAGCTACTGGCAGACATTTGTGTGTTGAAGCTATCTCTCACTACGGTGACTTTGTGGCAAAAGTTACTGAACTTTATCCAGAATATAATGTGCCTAGGATAAAACGAGATACACAACCCGGATTGTTGAGAGCAAAGGATGGATCAAAGAAGCTCATGGATTTGGAGAGTTTGAGGAACAAAGGATCCATTTCTTGA 918 0.463 MSKVVCVTGGSGCIGSWLVHLLLRRGYTVHATVQNLSDENETKHLEALEGAQTNLRLFQIDLLNYDTIVAAVRGCDGVFHLASPCIVDKVHDPQKELLDPAIKGTVNVLTAAKEAGVKRVVITSSISAITPSPDWPSDVVKREDCWTDTEYCKNKELWYPLSKTLAEKAAWDFSKANGLDVVVVNPGTVMGPVIPPRINASMLMLVQLLEGCIETYEDYFMGLVHFKDVALAHILVYENKEATGRHLCVEAISHYGDFVAKVTELYPEYNVPRIKRDTQPGLLRAKDGSKKLMDLESLRNKGSIS 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01345 305 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 288 - -
Vifa1g01345 305 Gene3D - 1 304 - -
Vifa1g01345 305 CDD FR_SDR_e 5 295 - -
Vifa1g01345 305 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 277 IPR036291 -
Vifa1g01345 305 FunFam Cinnamoyl-CoA reductase 1 1 299 - -
Vifa1g01345 305 Pfam NAD dependent epimerase/dehydratase family 5 246 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01345 Vifa-Chr1 218379171 218381702 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01345 3 305 Monolignol Biosynthesis Gene Families AT5G58490 72.013 1.92e-175 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01345 - - adu:107458329 523.857