Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g01314 | ATGTCGCCGGAGTTTCAGTCCAGCGGCGTGGCGACGCAGAAGTCTGATGTGTATGCTTTTGGAGTGGTGATACTGGAGCTTTTATCCGGGGAGGAGCCGTTGAAGTTCAAGTTTGACGAGAAGAGCCGTGATTTTGTGAGGAAATCGGTGATTGAGTCGGCGAGATCCGCCGTGGACGGTGGCGAGGGTGGCGTGGAAGGGAAGCTGAGGATGTGGGTGGATAGGAGGTTGAAAGATTCGTTTCCGGTTGATGTTGCTGAGAAGCTGACACGTGTAGCGTTGGATTGTGTACACGTGGACCCGGATCAAAGGCCTAACATGGGACGCGTCGCAGGGAAGATTTCCACGTTGTATTTGAAGTCTAAGCATTGGTCTGATAACATGAAATTGCCTGATATGTCTTTTTCATTGGCTCCTAGATGA | 423 | 0.5106 | MSPEFQSSGVATQKSDVYAFGVVILELLSGEEPLKFKFDEKSRDFVRKSVIESARSAVDGGEGGVEGKLRMWVDRRLKDSFPVDVAEKLTRVALDCVHVDPDQRPNMGRVAGKISTLYLKSKHWSDNMKLPDMSFSLAPR | 140 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g01314 | 140 | ProSiteProfiles | Protein kinase domain profile. | 1 | 119 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g01314 | 140 | PANTHER | OS09G0572100 PROTEIN | 1 | 140 | - | - | |
Vifa1g01314 | 140 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 110 | IPR011009 | - | |
Vifa1g01314 | 140 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 133 | - | - | |
Vifa1g01314 | 140 | Pfam | Protein tyrosine and serine/threonine kinase | 1 | 111 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g01314 | Vifa-Chr1 | 213254635 | 213255057 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g01314 | 1 | 136 | Receptor kinase-like Gene Family | AT1G51940 | 31.387 | 5.66e-17 | 74.3 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Vifa1g01314 | PK_Tyr_Ser-Thr | 1.7e-08 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g01314 | - | - | gmx:100792694 | 230.335 |