Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g01313 | ATGTGCAAAACCAAAATGGCCATTAACGCTTCTGCCCCAAAATCAACCCCACGTTCACAACAACAACAACGAACAAACCAAACACCAAAAACAACACCATCGTCATCAAAAACATCTTCAAAAACATCTTCAAAAACATCATCAAAAACATCATCATCAAACCCCACAAAACCCAAAACCCGTTCTTTCTCCGACAACCCATCCACCTCCTACGCCACCACAACCGGTTCAACCGGCTTCCGTCTCTCAACCGACACATCCATCTCTAGCCCAACATCCCTCACTACCCTCCGCAACACCCTCCCAGAAAACCCCAACATCTACGACTTCTCCGAAATCTGTTCCGCCACAAACAACTTCCTCTCCAAACGCTTCTCCTCCTCAACCCCTTGCTGGCACTGCACCCTCCGCGGCGCTGACGTCATCATCTTCCAACGCAAATTCCGACGCAAACTTCAAACCACTCAGCTCCGGGAACTTCTCTCCGTCGTCTGCCGTAGCCACCACGTCAGTATCATCAAACTCCTCGGTGTTTCAATCTCCGGCGAACATATTTACCTCGTGTACGAATTCGTTAACGGCGCTAATCTCTCCGATTGTTTACGTAACACCCGAAACGTTCATTTCACCGTTCTTTCTACATGGATTTCGAGAATGCAAGTCGCCACCGATCTCGCTCATGGACTTGATTACATTCACAACAAGACCGGGTTTGTCATTTCGGCGCAGCGCAACTCTGCGGTGAAGCCGTTGAGGAAAACGAAACCGCCACCAAACAATCGGGGGAAAAAGAAATCACGGAGGAAGCTAAATCGAGTCCATTGA | 825 | 0.4885 | MCKTKMAINASAPKSTPRSQQQQRTNQTPKTTPSSSKTSSKTSSKTSSKTSSSNPTKPKTRSFSDNPSTSYATTTGSTGFRLSTDTSISSPTSLTTLRNTLPENPNIYDFSEICSATNNFLSKRFSSSTPCWHCTLRGADVIIFQRKFRRKLQTTQLRELLSVVCRSHHVSIIKLLGVSISGEHIYLVYEFVNGANLSDCLRNTRNVHFTVLSTWISRMQVATDLAHGLDYIHNKTGFVISAQRNSAVKPLRKTKPPPNNRGKKKSRRKLNRVH | 274 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g01313 | 274 | SUPERFAMILY | Protein kinase-like (PK-like) | 148 | 235 | IPR011009 | - | |
Vifa1g01313 | 274 | MobiDBLite | consensus disorder prediction | 9 | 92 | - | - | |
Vifa1g01313 | 274 | MobiDBLite | consensus disorder prediction | 247 | 274 | - | - | |
Vifa1g01313 | 274 | Gene3D | Transferase(Phosphotransferase) domain 1 | 133 | 240 | - | - | |
Vifa1g01313 | 274 | ProSiteProfiles | Protein kinase domain profile. | 69 | 274 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g01313 | 274 | PANTHER | OS09G0572100 PROTEIN | 1 | 238 | - | - | |
Vifa1g01313 | 274 | MobiDBLite | consensus disorder prediction | 256 | 274 | - | - | |
Vifa1g01313 | 274 | MobiDBLite | consensus disorder prediction | 1 | 92 | - | - | |
Vifa1g01313 | 274 | Pfam | Protein tyrosine and serine/threonine kinase | 150 | 236 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g01313 | Vifa-Chr1 | 213253696 | 213254596 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g01313 | 108 | 234 | Receptor kinase-like Gene Family | AT2G19230 | 30.769 | 6.84e-14 | 69.7 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Vifa1g01313 | PK_Tyr_Ser-Thr | 2.4e-09 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g01313 | - | - | gmx:100792694 | 303.908 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vifa1g01313 | 1 | 213253696 | 213254596 | Vifa1g01313 | 1 | 213253696 | 213254596 | ECH |