Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01310 ATGGCAACGGCGGCCTGTTCAACGGACTTATCTCGAGAATCCTCCTGCCGCGACGGCTCCGCCGCATCCCACCTAAAACTAATCTCCCTGTTCGTCATCTTCCTCACAAGCGCCATCGGCATGTCAGCCCCCGTCCTCCTCGCCCGTATCTTCCGGGGAAAACCGTTATACGACAGAGCCTTAGTTCTAATAAAATGCTTCGCGGCGGGAGTGATCCTCTCCACCTCCTTAGTCCACGTCCTCCCCGACGCGTACTCCGCACTCGCCGACTGCCACGTGGCCTCCCGTCATCCATGGAAGGATTTCCCGTTCTCCGGACTCGTGACTCTCATCGGTGCTATTCTCGCTCTGTTCGTCGACCTCGTGGCGAGCTCTCACGTCGGACACGCTGAGTATGAGCAGATCGGAGCCGGAGACAAAGAATTGGGAGTTGTTGAACTTGGAGGAGTTGGAAGTGAAAGAGGTGAAGAATTGGTTAGGTTGAAACAGAGACTGGTTTCGCAGGTCTTGGAGATTGGGATAATTTTTCATTCAGTCATAATTGGTGTGACTATGGGTATGTCACAGAATGTTTGTACTATTCGCCCTTTAGTTGCGGCTTTGGCTTTTCATCAGATTTTTGAAGGGATGGGTCTTGGTGGCTGTGTTGCTCAGGCAGGATTTAGCTATGGAACAGTGGCGTACATGTGTTTCATGTTCTCAGTAACAACTCCATTGGGGATAATTTTGGGGATGGTATTATTCTCATTAACAGGCTATGATGATAGTAACCCAAATGCATTAATCATGGAAGGGTTACTAGGTTCAATTTCTTCTGGAATTCTTATATACATGGCTCTTGTTGATCTTATAGCAGCTGATTTCTTTCACAATAAGCTTATGAACTCGGATCCACGCTTAAAAAAGGCTTCTTTTGTTGCCTTAACCATGGGTTCTGCTTCTATGTCTATTCTAGCTCTTTGGGCTTGA 969 0.4819 MATAACSTDLSRESSCRDGSAASHLKLISLFVIFLTSAIGMSAPVLLARIFRGKPLYDRALVLIKCFAAGVILSTSLVHVLPDAYSALADCHVASRHPWKDFPFSGLVTLIGAILALFVDLVASSHVGHAEYEQIGAGDKELGVVELGGVGSERGEELVRLKQRLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALAFHQIFEGMGLGGCVAQAGFSYGTVAYMCFMFSVTTPLGIILGMVLFSLTGYDDSNPNALIMEGLLGSISSGILIYMALVDLIAADFFHNKLMNSDPRLKKASFVALTMGSASMSILALWA 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01310 322 Pfam ZIP Zinc transporter 24 134 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vifa1g01310 322 Pfam ZIP Zinc transporter 157 319 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vifa1g01310 322 PANTHER ZINC/IRON TRANSPORTER 24 316 - -
Vifa1g01310 322 NCBIfam ZIP zinc/iron transport family 12 322 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01310 Vifa-Chr1 212292890 212294574 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01310 1 322 Inorganic Solute Cotransporters AT2G30080 67.151 1.28e-160 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01310 K14709 - gmx:100797310 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g01310 1 212292890 212294574 Vifa1g01310 1 212292890 212294574 ECH