Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01303 ATGGCAGGACTTGTTGGAGTTGTTTCTGTTTTTCCAGATGAAAAGAGACAACTCCTCACAACAAGATCATGGGATTTTATTGGCTTTACACAACAGAATCGAAAAGCTTCAATGATAGAGGGTTCAGTCCCACCACCTACCAAATGGAAGGGTTCATGCCAAGCTTCTGATTTTACATGCAATAATAAGTTAATTGGAGCAAAGTTTTATCCACCACTCCATAATGAACTAACCTCAAAAGATATCGAATCTCCTAGAGATTCAAGAGGTCATGGTACGCATACGACATCAACAATGGCTGGAAATTCGATTAGTATGGAAAGCATGTTAGGCCTTGCACAAGGAACAGCTCGAGGAGGAGTTCCATCAGCACGCATTGCTGTATATAAAGTGTATTGGTGTGAAGGATGCAATGAAGCAGCAAGAATACCTGCTTCATTGCATCCTTCAAACCAACACACTTTATATACAGCAATGCGTGCTGATGGAAATCTTCCTCTAACAGTTCCTTGTGCAAGGCCTAACATGCTTGCCATACTAACAGAATTTCCAGTCATCGTTGATGCTGTATGCGTACCATGA 582 0.4141 MAGLVGVVSVFPDEKRQLLTTRSWDFIGFTQQNRKASMIEGSVPPPTKWKGSCQASDFTCNNKLIGAKFYPPLHNELTSKDIESPRDSRGHGTHTTSTMAGNSISMESMLGLAQGTARGGVPSARIAVYKVYWCEGCNEAARIPASLHPSNQHTLYTAMRADGNLPLTVPCARPNMLAILTEFPVIVDAVCVP 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01303 193 SUPERFAMILY Subtilisin-like 20 145 IPR036852 GO:0004252|GO:0006508
Vifa1g01303 193 Gene3D Peptidase S8/S53 domain 40 143 IPR036852 GO:0004252|GO:0006508
Vifa1g01303 193 MobiDBLite consensus disorder prediction 77 100 - -
Vifa1g01303 193 Pfam Subtilase family 78 139 IPR000209 GO:0006508|GO:0008236
Vifa1g01303 193 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 6 140 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01303 Vifa-Chr1 211198370 211199647 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01303 7 139 Subtilisin-like Serine Gene Family AT5G59190 50.000 9.12e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01303 - - psat:127118237 223.402