Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01301 ATGATGCAAGGGCAAGCTTCTATAGATATGGCAATCTCTTTTCCTTTGCCAGCATGTTATCTTCAATTAAAAGATGCTGCAAAAATACCTACACACATCCGTTCTACAAGTTTTCCGACTGCAGCCATCTTAAAGACCATTGAGGTCAAAGATAGTTTGGCACCTGTTGTTGCCTCTTTTTCATCAAGGGGTCCAAACAAAGCTGCACCCGAAATTTTGAAGCCCGACTTTATTCCTCCTGGAGTTGACATCATGGCTAGTTGGTCTCCAATTTCTGATATTTCTGGTGAGACCAGAAAATTGATGTTCAATATTATATCAAGAACATCAATGGCATGCCCTCATGTATCCGGAGCAGCGGTATATGTAAAGTCATTCCATCTCACATGGTTACCCGCTGCTATTCGGTCTGCTCTTATGATAACAGGTATTAGAAATAAATAA 444 0.4054 MMQGQASIDMAISFPLPACYLQLKDAAKIPTHIRSTSFPTAAILKTIEVKDSLAPVVASFSSRGPNKAAPEILKPDFIPPGVDIMASWSPISDISGETRKLMFNIISRTSMACPHVSGAAVYVKSFHLTWLPAAIRSALMITGIRNK 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01301 147 Gene3D Peptidase S8/S53 domain 51 143 IPR036852 GO:0004252|GO:0006508
Vifa1g01301 147 Gene3D - 8 50 - -
Vifa1g01301 147 SUPERFAMILY Subtilisin-like 52 142 IPR036852 GO:0004252|GO:0006508
Vifa1g01301 147 ProSiteProfiles Serine proteases, subtilase domain profile. 1 147 - -
Vifa1g01301 147 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 11 142 IPR045051 -
Vifa1g01301 147 Pfam Subtilase family 54 142 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01301 Vifa-Chr1 211175352 211175969 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01301 9 143 Subtilisin-like Serine Gene Family AT5G03620 49.275 2.89e-36 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01301 - - cam:101506276 204.912