Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01300 ATGTTGCAATACCTTTTCTTCTTCATGCTTTTGTTGGGAGTTTCAACTGGCTATGATGGACCCCTATGTGACTCAGCTGCTAACACTAAGATTTATATTGTCTATACCGGAGATACCATCAAAGATGAAGCTGCTTCTTTACTCCATTATAATTATTTGCTACAACAAGCAACAGACAGTCCACCACCTACCAAATGGAAGGGTTCATGCCAAGCTTCTGATTTTACATGCAATAATAAGTTAATTGGAGCAAAGTTTTATCCACCACTCCATAATGAACTAACCTCAAAAGATATCGAATCTCCTAGAGATTCAAGAGGTCATGGTACGCATACAGCATCAACGGTGGCTGGAAATTCTGTTAGTATGGCAAGCATGTTAGGTCTTGCACAAGGAAACCCGCTAGAGGAGGAGTTCCATCAGCACGCATTGCTGTATATAAAGTGTGTTGGTTTGAAGGATGCAATGAAGCAGGTCCATATCCTAAATCTCTACAAAATTATCAACCTTGGGCAATTATTGTTGGTGCTAGCACCTTGGATAGAAAGTTTATTACCAAGGTCAAAACAGGAGACAATAGAACTTTCAAGGGTATTTCTATGA 603 0.3964 MLQYLFFFMLLLGVSTGYDGPLCDSAANTKIYIVYTGDTIKDEAASLLHYNYLLQQATDSPPPTKWKGSCQASDFTCNNKLIGAKFYPPLHNELTSKDIESPRDSRGHGTHTASTVAGNSVSMASMLGLAQGNPLEEEFHQHALLYIKCVGLKDAMKQVHILNLYKIINLGQLLLVLAPWIESLLPRSKQETIELSRVFL 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01300 200 Gene3D Peptidase S8/S53 domain 59 133 IPR036852 GO:0004252|GO:0006508
Vifa1g01300 200 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 60 133 IPR045051 -
Vifa1g01300 200 SUPERFAMILY Subtilisin-like 73 124 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01300 Vifa-Chr1 209498131 209500367 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01300 61 132 Subtilisin-like Serine Gene Family AT5G59190 60.274 2.33e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01300 - - psat:127118237 139.813