Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01299 ATGAGTTCAGAAAATAACCCAGATGCAGAATTTGCTTATGGAGCTGGACAAATTGATCCAGTAAAAGCCATTAATCCAGGTCTAATATATGATGCTGATGAAATGGATTATGTTAGATTTTTGTGTGGACAGAGCTTCAATACAACTGACCTACAACAAACTACCTGGGATGACAACATATGCTCTAACACAACTTATCTGTCTGCAAGAGATTTGAACTATCCCTCTTTTGCTCTAAATGTCCAAAGATCCAAACACCATTTTAGAGGAAGCTTCCAAAGGATCGTCACAAACGTAGGAACACCGAATTCTATATACACAGCAAATGTGACAGCCCCTGAAGGACTTCATATTTCAGTAAAACCTTCAGTTTTGTCATTCACTTCAATCGGTGAAAGACAGACATATGTCCTCACAATAGATGGAAAAATGAAGAAGGATACTATGTTGTCGGCTTCTTTGGTATGGAATGATGGCAACTTTAAAGTGAGAAGCCCAATAATTGTTTTTGATGATAGAGCTGAGAAAGATGCAGGTTCTTCAAATCTATATCGATAA 558 0.3746 MSSENNPDAEFAYGAGQIDPVKAINPGLIYDADEMDYVRFLCGQSFNTTDLQQTTWDDNICSNTTYLSARDLNYPSFALNVQRSKHHFRGSFQRIVTNVGTPNSIYTANVTAPEGLHISVKPSVLSFTSIGERQTYVLTIDGKMKKDTMLSASLVWNDGNFKVRSPIIVFDDRAEKDAGSSNLYR 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01299 185 Gene3D Peptidase S8/S53 domain 3 37 IPR036852 GO:0004252|GO:0006508
Vifa1g01299 185 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 8 169 IPR045051 -
Vifa1g01299 185 Pfam Fibronectin type-III domain 71 169 IPR041469 -
Vifa1g01299 185 Gene3D - 41 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01299 Vifa-Chr1 209496338 209496976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01299 10 170 Subtilisin-like Serine Gene Family AT5G59120 42.073 2.46e-42 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01299 - - cam:101506276 239.965