LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa1g01297	ATGTCTCGAGCTGAAGAACTCTGGGAGCGGTTAGTTCGTGCTGCTTTAAGAAGGGAAAGAACTGGTGATGATGCATTTGGGCAACCTGCTGGTGGAATTGCTGGGAATGTGCCATCTGCACTTGCTAAAAATAGAGATATTGATGAAATTTTAAGAGTTGCAGATGAAATTCAAGATGATGCCCCCACAGTTTCTCGAATATTATGTGAGCATGCATATTCATTATCTCAAATTTGGACCCCAACAGTGAAGGCCGAGGTGTTTTACAATTCAAGACCGGAGTTCTACAAGAGTTACAGAAAGAAAAATAATGTGGATAAATTACTTGAGGAGGAAATGCAATTGAGGGAATCTGGTGCTTTCAGCCGTAATCTTGGCGAGTTGGAGCGTAAGACTGTGAAGAGGAAAAGGGTTTTTGCTACCTTAAAGGTTTTAGGAACAGTACTTGAGCAGCTGAGTGAGGAAATTCCTGATGAGCTTAAGCGGGTCATGGAATCAGATTCTGCATCAACCGAGGATCTGATTGCTTACAACATCATCCCTATAGATGCTGCTTCTTCAACAAATGCTATTGCTTTTTTCCCCGAGGTGCAAGCAGCAATTTCGGCTCTGAAGTATTTCAATGGCTTGCCTGAACTGCCCAGGGCCTATTTCATCCCTCCTACAAGGAATGCCAACATGTTAGATTTTCTGCAGTATACTTTTGGATTTCAGAAAGATAATGTAGCTAATCAGTGCGAACACATAGTTCATCTGCTTGCAAATGAGCAATCTCGGCTTGGAGTTCCAGACAAAACCGAACCCAAATTGGATGAAGCAGCCTTGCATGAAGTATTCCTCCTAATCACGCTTCGAAATCCACTAAACCACGGTCGTTCTCGTTCTCGTTCTTCAGCACCAACACCGAAATCGGAACGAGAAGGAAGAAGAGGAGGTCCAGCGGCGGCCACGGCACCTTTAGTTCCTAGGTTTTGTTTCGCTTCAGCAATTTGTGTTTCTTCCTTTTGGGTCTGGGTCTTCCAACGACCCGGCCCATTTCCCTCACCCGCTCCACTCTCTTCAACTAAGCCCGTTTTCTTTTCAGCTTAA	1089	0.4444	MSRAEELWERLVRAALRRERTGDDAFGQPAGGIAGNVPSALAKNRDIDEILRVADEIQDDAPTVSRILCEHAYSLSQIWTPTVKAEVFYNSRPEFYKSYRKKNNVDKLLEEEMQLRESGAFSRNLGELERKTVKRKRVFATLKVLGTVLEQLSEEIPDELKRVMESDSASTEDLIAYNIIPIDAASSTNAIAFFPEVQAAISALKYFNGLPELPRAYFIPPTRNANMLDFLQYTFGFQKDNVANQCEHIVHLLANEQSRLGVPDKTEPKLDEAALHEVFLLITLRNPLNHGRSRSRSSAPTPKSEREGRRGGPAAATAPLVPRFCFASAICVSSFWVWVFQRPGPFPSPAPLSSTKPVFFSA	362

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa1g01297	362	MobiDBLite	consensus disorder prediction	290	314	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa1g01297	Vifa-Chr1	208989432	208990727	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vifa1g01297	1	280	Cell Wall Biosynthesis	AT3G07160	61.364	1.27e-108	347

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa1g01297	K11000		-	ccaj:109815119	431.795