Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01296 ATGTCTCGAGCTGAAGAACTCTGGGAGCGGTTAGTTCGTGCTGCTTTAAGAAGGGAAAGAACTGGTGATGATGCATTTGGGCAACCTGCTGGTGGAATTGCTGGGAATGTGCCATCTGCACTTGCTAAAAATAGAGATATTGATGAAATTTTAAGAGTTGCAGATGAAATTCAAGATGATGCCCCCACAGTTTCTCGAATATTATGTGAGCATGCATATTCATTATCTCAAATTTGGACCCCAACAGTGAAGGCCGAGGTGTTTTACAATTCAAGACCGGAGTTCTACAAGAGTTACAGAAAGAAAAATAATGTGGATAAATTACTTGAGGAGGAAATGCAATTGAGGGAATCTGGTGCTTTCAGCCGTAATCTTGGCGAGTTGGAGCGTAAGACTGTGAAGAGGAAAAGGGTTTTTGCTACCTTAAAGGTTTTAGGAACAGTACTTGAGCAGCTGAGTGAGGAAATTCCTGATGAGCTTAAGCGGGTCATGGAATCAGATTCTGCATCAACCGAGGATCTGATTGCTTACAACATCATCCCTATAGATGCTGCTTCTTCAACAAATGCTATTGCTTTTTTCCCCGAGGTGCAAGCAGCAATTTCGGCTCTGAAGTATTTCAATGGCTTGCCTGAACTGCCCAGGGCCTATTTCATCCCTCCTACAAGGAATGCCAACATGTTAGATTTTCTGCAGTATACTTTTGGATTTCAGAAAGATAATGTAGTTAATCAGTGCGAACACATAGTTCATCTGCTTGCAAATGAGCAATCTCGGCTTGGAGTTCCAGACAAAACCGAACCCAAATTGGATGAAGCAGCCTTGCATGAAGTATTCCTCCTAATCACGCTTCGAAATCCACTAAACCACGGTCGTTCTCGTTCTCGTTCTTCAGCACCAACACCGAAATCGGAACGAGAAGGAAGAAGAGGAGGTCCAGCGGCGGCCACGGCACCTTTAGTTCCTAGGTTTTGTTTCGCTTCAGCAATTTGTGTTTCTTCCTTTTGGGTCTGGGTCTTCCAACGACCCGGCCCATTTCCCTCACCCGCTCCACTCTCTTCAACTAAGCCCGTTTTCTTTTCAGCTTAA 1089 0.4435 MSRAEELWERLVRAALRRERTGDDAFGQPAGGIAGNVPSALAKNRDIDEILRVADEIQDDAPTVSRILCEHAYSLSQIWTPTVKAEVFYNSRPEFYKSYRKKNNVDKLLEEEMQLRESGAFSRNLGELERKTVKRKRVFATLKVLGTVLEQLSEEIPDELKRVMESDSASTEDLIAYNIIPIDAASSTNAIAFFPEVQAAISALKYFNGLPELPRAYFIPPTRNANMLDFLQYTFGFQKDNVVNQCEHIVHLLANEQSRLGVPDKTEPKLDEAALHEVFLLITLRNPLNHGRSRSRSSAPTPKSEREGRRGGPAAATAPLVPRFCFASAICVSSFWVWVFQRPGPFPSPAPLSSTKPVFFSA 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01296 362 MobiDBLite consensus disorder prediction 290 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01296 Vifa-Chr1 208978919 208980214 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01296 1 280 Cell Wall Biosynthesis AT3G07160 61.364 3.49e-108 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01296 K11000 - ccaj:109815119 430.254