Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01292 ATGAACCCTTCTCACCAATTTATAGAACATGGAATTTCTCACCAGAATATAAAGAGAACTTGTTGTGCAAATGTGCTCACTCTAGCATACCAGAGTCTTGGAGTAGTCTATGGTGACCTTAGCACTTCTCCTCTCTATGTATACAAGACCTCATTCTCAGGGAAATTGAGTCTCAAAGAAGATGATGAAGAGATTCTCGGCGTGCTTTCGTTTATCTTCTGGACATTTACAGTTATCGCGCTCTTCAAATATGTTTTCATTGTCATGTCTGCTGGTGACAATGGAGAAGGAGGTACTTTTGCATTGTACTCACTTCTCTGCAGACATGCGAAACTAAGCATGTTGCCGAATCAGCAACCTGCGGACCAAGATTTATCTGCTTATTCGACTAAGGATTCTGCAGATACATGGCAGTCTTCTCGGTTGAAGCTGTTCTTCGAAAAGCACCCGAGATTTCAGAAAGGACTTCTCATTTTTGTTCTCTTGGGAACGTGTATGACGATTGGCGATGGTGTGATTACTCCTGCTATATCAGTATTTTCAGCAGTTTCAGGAGTTCAAGTCAAAATCAATCAACTTCATGACAATTATGTTGCTATCGTCTCGTGTATCATTTTAGTTGGCCTTTTCTCCATTCAGCATCATGGAACACATAGAGTTGCCTTCTTGTTTGCACCAGTTGTTGCAGCATGGCTTTTGTGCATCAGTGGTGTTGGTATATACAACATTTTCCGCTGGAACAGACAAGTATATCGCGCACTTTCTCCCGTTTATATGTATAGGTTTCTCAGAACCAATGGCATGGAAGGATGGTTATCATTAAGTGGAGTTGTGCTTTCAATAACAGGGGTGGAGACAATGTATGCTGACATGGGTCATTTTTCTGCACTCTCAATCAAGATAGCTTTCACATGTTTAGTATATCCATGCCTGATTTTGGCATACATGGGAGAAGCTGCATTTCTCTCTAAACACCATTATGACATTAAGAGAAGTTTCTACAAGGCCATACCAGAAGCTGTATTTTGGCCAGTTTTTATAGTTGCAACTTTAGCTGCTGTTGTAGGAAGTCAAGCAGTGATTTCTGCAACTTTTTCTATCATAAGCCAATGCTGCGCGTTGAATTGTTTTCCTCGAGTCAAGATTGTTCATACTTCTAGCAAAATATATGGACAGATTTATGTTCCGGAAATCAATTGGATACTAATGTGCCTTTGTTTAGCTGTCACAATTGGCCTAAGGGATACAAACATGATGGGCCATGCATATGGATTGGCTATCACCACAGTTATGTTTGTGACAACATGTTTGATGACACTAGTAATCATAATTGTTTGGAAACAAGGGATAATAAAAGCACTTTCATGTTTGCTTTTGTTTGGATCTATTGAACTTCTTTACATCTCAGCTTCTGCCTGCAAAATCCCCCAAGGAGGATGGATACCGATTTTACTATCGATCATTTTCATGGCCATAATGTTCACATGGAACTACGGAACAATGAAGAAACACCAATTCGATGTGGAAAACAAGGTCTCAATGAGCAAGATGCTATCCTTAGGACCATGCTTAGGCATGGTCCGTGTCCCCGGAATCGGATTCATTTTCAGTAATCTCGCTTCCGGTATCCCTGCCATTTTCGGCCATTTCATTACAAACTTACCCGCATTCCATCAGGTGTTAGTTTTTATATGTGCTAAGTCAGTTCAAGTCCCTTATGTTAGTGAAAACGAAAGACTAGTCATCAGCAGGATCGGCCCGAAGGAGTTCCACATGTTCCGTTGCATCGTCCGGTACGGTTACAAAGATATGCAACAAGAGAATTACAATTTTGAGAACAAATTGGTATCTGCAATAATACAGTTTATAGAAACAGAAGAGAATGCTGAAGAACAAACAAATGAACTGACTATAGATGATGGAAACATAAACATGGAAGAGTCGTATAAAGCCGAGTCGATGCAAATCTTAAAAGCCAAGGAATCAGGTGTTACTTATATAATTGGACATTCCTATGCAGAAGCTAAAAAATCATCTTCTATTTTGAAGAAATTTGGAATAGATATTGTTTATGCTTTTCTAAGCAAAAACTGCAGAGAACCTGATATTATGCTGGATGTAGCTCATACTTCATTGCTTGAAGTTGGTATGGCTTACCATGTTTAA 2166 0.3957 MNPSHQFIEHGISHQNIKRTCCANVLTLAYQSLGVVYGDLSTSPLYVYKTSFSGKLSLKEDDEEILGVLSFIFWTFTVIALFKYVFIVMSAGDNGEGGTFALYSLLCRHAKLSMLPNQQPADQDLSAYSTKDSADTWQSSRLKLFFEKHPRFQKGLLIFVLLGTCMTIGDGVITPAISVFSAVSGVQVKINQLHDNYVAIVSCIILVGLFSIQHHGTHRVAFLFAPVVAAWLLCISGVGIYNIFRWNRQVYRALSPVYMYRFLRTNGMEGWLSLSGVVLSITGVETMYADMGHFSALSIKIAFTCLVYPCLILAYMGEAAFLSKHHYDIKRSFYKAIPEAVFWPVFIVATLAAVVGSQAVISATFSIISQCCALNCFPRVKIVHTSSKIYGQIYVPEINWILMCLCLAVTIGLRDTNMMGHAYGLAITTVMFVTTCLMTLVIIIVWKQGIIKALSCLLLFGSIELLYISASACKIPQGGWIPILLSIIFMAIMFTWNYGTMKKHQFDVENKVSMSKMLSLGPCLGMVRVPGIGFIFSNLASGIPAIFGHFITNLPAFHQVLVFICAKSVQVPYVSENERLVISRIGPKEFHMFRCIVRYGYKDMQQENYNFENKLVSAIIQFIETEENAEEQTNELTIDDGNINMEESYKAESMQILKAKESGVTYIIGHSYAEAKKSSSILKKFGIDIVYAFLSKNCREPDIMLDVAHTSLLEVGMAYHV 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01292 721 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 22 720 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa1g01292 721 NCBIfam potassium uptake protein 28 721 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa1g01292 721 Pfam K+ potassium transporter 30 603 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01292 Vifa-Chr1 208320741 208323979 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01292 122 721 Inorganic Solute Cotransporters AT2G30070 68.667 0.0 888
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01292 K03549 - gmx:100798458 1239.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g01292 1 208320741 208323979 Vifa1g01292 1 208320741 208323979 ECH