Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01243 ATGGCAAAGGACCAAATGCAGGTGCTAAATGCACTTGATGTGGCAAAGACACAAATGTACCACTTCACCGCAATCATCATAGCTGGTATGGGCTTCTTCACAGATGCATATGATCTATTCTGCATATCCCTTGTTACCAAGTTGCTCGGTCGTATATACTACCATGTTGACGGTGCAGCGAAGCCAGGAACTTTGCCTCCGAATGTATCCGCTGCAGTAAATGGGGTTGCTTTCTGTGGTACACTTTCAGGGCAACTTTTCTTTGGCTGGCTTGGTGATAAGTTGGGGAGGAAAAAAGTGTATGGCATGACACTTTTGATTATGGTAATATGTTCACTTGGTTGCGGCCTTTCTTTCGGACACACTCCAAAACAAGTCATGACAACTCTTTGCTTTTTCCGCTTCGGACTTGGGTTTGGTATTGGTGGAGACTACCCGCTTTCGGCTACTATAATGTCGGAATATTCTAATAAGAAAACTCGTGGCGCTTTCATTGCTGCAGTCTTTGCCATGCAGGGTTTTGGAATTTTGGCAGGTGGTATATTTGCAATCATAATTGCAGCTATATTCAAATCCAACTATGATTCTCCGTCATACGCGGTTGATCCACTTGGTTCAACCGTTCCACAAGCAGACTACGTTTGGAGGATAATCATGATGGTAGGAGCACTCCCGGCTGCACTGACTTACTATTGGCGGATGAAGATGCCAGAAACTGCCCGTTACACCGCTTTAGTCGCTAAGAACACGGCGCAGGCAGCAGCAGATATGTCTAAGGTTCTACAGGTTGAGATTCAAGCCGAAGAACCAGTGAAAGAAGAGAAGGAGAAATTCGGCTTGTTCTCAAACGAGTTTCTAAGTCGCCACGGACTACATCTTCTCGGTACATCAATCACTTGGTTCTTGCTTGATATAGCATTTTATAGCCAAAATCTATTCCAGAAGGATATTTTCAGTGCAGTTGGTTGGATACCTCCTGCTCAAACCATGAACGCACTCGAGGAGGTTTACAAAATCGCAAGAGCTCAAACACTTATCGCTCTTTGCAGTACGGTTCCAGGCTACTGGTTTACAGTTGCTTTCATCGACAGGATAGGAAGATTTGCAATTCAATTGATGGGATTTTTCTTTATGACAGTATTCATGTTTGCGCTTGCCATTCCTTACGATCACTGGACTCTTAAGGAAAACCGCATTGGATTTGTGGTATTATATTCCTTGACCTTTTTCTTTGCGAATTTCGGACCTAATGCTACCACATTTGTTGTGCCTGCAGAGATTTTTCCTGCTAGATTTCGTTCTACTTGCCATGGAATATCATCTGCGGCAGGGAAGCTCGGAGCTATAATTGGTGCATTTGGTTTCTTATACTTGGCACAGAACGAGGATAAGAGTAAAGCGGATGCGGGGTATCCTGCGGGTATTGGTGTTAAGAAATCACTGTTTGTGTTGGGTGGGGTCAACATTCTGGGATTCTTGTTTACTTTCTTGGTGCCGGAGGCAAATGGAAAATCTTTGGAGGAGATGTCAGGTGAGAATGAAGAGGAAGTTGAAGCCAACGGAGAGTTGGAGCAATCTGGTTCTAATAACAACAAAACAGTCCCACTTGTCTAG 1614 0.4418 MAKDQMQVLNALDVAKTQMYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAAKPGTLPPNVSAAVNGVAFCGTLSGQLFFGWLGDKLGRKKVYGMTLLIMVICSLGCGLSFGHTPKQVMTTLCFFRFGLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGIFAIIIAAIFKSNYDSPSYAVDPLGSTVPQADYVWRIIMMVGALPAALTYYWRMKMPETARYTALVAKNTAQAAADMSKVLQVEIQAEEPVKEEKEKFGLFSNEFLSRHGLHLLGTSITWFLLDIAFYSQNLFQKDIFSAVGWIPPAQTMNALEEVYKIARAQTLIALCSTVPGYWFTVAFIDRIGRFAIQLMGFFFMTVFMFALAIPYDHWTLKENRIGFVVLYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSAAGKLGAIIGAFGFLYLAQNEDKSKADAGYPAGIGVKKSLFVLGGVNILGFLFTFLVPEANGKSLEEMSGENEEEVEANGELEQSGSNNNKTVPLV 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01243 537 CDD MFS_PhT 25 500 - -
Vifa1g01243 537 SUPERFAMILY MFS general substrate transporter 12 510 IPR036259 -
Vifa1g01243 537 MobiDBLite consensus disorder prediction 522 537 - -
Vifa1g01243 537 Gene3D MFS general substrate transporter like domains 20 526 IPR036259 -
Vifa1g01243 537 MobiDBLite consensus disorder prediction 507 537 - -
Vifa1g01243 537 Coils Coil 506 526 - -
Vifa1g01243 537 FunFam Inorganic phosphate transporter 1-6 20 524 - -
Vifa1g01243 537 Pfam Sugar (and other) transporter 26 510 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vifa1g01243 537 NCBIfam phosphate:H+ symporter 11 512 IPR004738 GO:0005315|GO:0006817|GO:0016020
Vifa1g01243 537 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 22 501 - -
Vifa1g01243 537 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 503 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01243 Vifa-Chr1 201423680 201425293 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01243 1 518 Inorganic Solute Cotransporters AT3G54700 82.852 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01243 K08176 - gmx:100803626 899.427