Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01236 ATGAAACTCTTCACATCATCATCATCATCATCATCATCATCATCATCACCTTCGTCTTCATTAACTTTTAGTTTCGACCCGACATTTTGCAGCTCAAAAACTATATCTGCAGGGTGTTTCACAACCATTTTTCATAGGATTAGAGAGTTTCATTCGAAGTTCACAAGTGAAAAAGTTCAAAAGTTCAAAACTAACACTAGAAATAATAGTACTATAACTTCTTCGCCTTCGGGTATAGTTGCAAGGTTGATGGGTTTGGATTCAATGGCAGAGAATAAGATAGGAATATGTCTTGAATCAACACAAAGTTCAAAAGTTCACAATGTATCACAAGGTTTTCAATTGCTTGAAAATGAGAACTTTTTGGTGTTTAGCTTTGAAAGTGGAAGTGAGGGTAGAAAATTGAAGTCTAAAGGGAGAAGAAAAGAAAAGGGTTGTGTTGATTTGAAGAAGAGAAGAGAAGAGACAAATGAGGTGAGGAAAAACAAGAGGGAGATGGTGAATGATGGTGAAGTTCAGTTTGAGAAGAGTTTGTTTAAGGAAGTTGGTAATGGTGAGAAAGTGAAGAAGAGAAAGAAAGGAAAAACATGTTTTGTGGAAAATAAGGTTGAATGTGAAATTGGTTCAGAAGATTCTAGTCCTGTTTCTGTCTTTGATTTTGAGCGTGATGTTTCTGGAACAGAGGAAGATCTTTGTGATGTGGCTATGAGTTGGAGAAGAAAATTATCACCAGTGCTTGAAAATGACCAGCTCTATATTCAACATTCTGATAGTAACATGATGAATGAAGAAGAGATGAAAGTTGAGAGCAACATGCATGAAGGATCAAAGAAAAAAGAGAGACAAAACCATGAATGTGTAGATATTTGGAGTAAAATTTGCAGGCTAGTTGAAGATGAATTGGTTGGATCAAATCAATTACAAGAAGTAAAGAGAAAACAAAGTGATTTGGAAAGTTTAAGTGCTGATTTAGAGTCAGTGATTTTAGATGATTTGTTAGATGAGCTTGTAGATCAATTTGTTATTTGTTTGTAA 1035 0.3469 MKLFTSSSSSSSSSSSPSSSLTFSFDPTFCSSKTISAGCFTTIFHRIREFHSKFTSEKVQKFKTNTRNNSTITSSPSGIVARLMGLDSMAENKIGICLESTQSSKVHNVSQGFQLLENENFLVFSFESGSEGRKLKSKGRRKEKGCVDLKKRREETNEVRKNKREMVNDGEVQFEKSLFKEVGNGEKVKKRKKGKTCFVENKVECEIGSEDSSPVSVFDFERDVSGTEEDLCDVAMSWRRKLSPVLENDQLYIQHSDSNMMNEEEMKVESNMHEGSKKKERQNHECVDIWSKICRLVEDELVGSNQLQEVKRKQSDLESLSADLESVILDDLLDELVDQFVICL 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01236 344 Pfam DUF761-associated sequence motif 78 89 IPR032795 -
Vifa1g01236 344 PANTHER OS05G0128300 PROTEIN 31 93 - -
Vifa1g01236 344 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01236 Vifa-Chr1 200530562 200531821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01236 32 337 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 25.824 8.50e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01236 - - psat:127118543 503.056