Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01218 ATGGCTACTGCAATAACAATAGCAATATTTTCTTTCCTTCTCTTTACTTTCATATACCTATTATCCAAAATCTCTTTTCGTGCAAAACAAAATACCTTACATCATAAGAAGCCACCAGGTCCACCAACACTACCGATAATCGGAAACCTTCACATGCTAGGCAAGCTTCCACACCGAGCACTTGAAACACTCTCTAAAAAATATGGCCCAATCATGTCTTTACAACTAGGTCAAGTCCCAGCTATTATTATTTCATCTTCAAAAGCAGCTGAATTATTTCTCAAAACACACGACTTAGTTTTTGCAAGCAGGCCAAAGACTCAAGGTTCTGAACTCATGTCTTATGGTTCCAAAGGGGTGGCTTTTTCTGAGAAAAATGAGTTGAGTGTTTTGGTTAAAACATTGGAAAAAGCTGCTTTGGTGGGTGAGGTTGTAAATGTTAGTGAGGCTGTGGAAAATCTTGTTCAAGATATTATATATAAGATGATATTAGGTAGAAGTAGGTATGAGCAATTTGACTTGAAGAAGTTGGTTCAACAAGGATTGACTTTGATTGGAGCCTTTAATCTAGCTGATTATGTTCCTTGGTTAGGAGTATTTGATCTTCAGGGAATAACACGAGGTTTCAAGAAAACCAGTAAAACACTGGATGAGATATTAGAGATGATAATAGCAGAGCATGAAGAAACATCTAATGTAGACAAAACTCGTGCTGAAGACTTTGTAGACATACTTCTTTCAATTATGCATCAAACTATTGATTACGAGAGTGAACAAAATCAAGAAGTCATTGATCGAACTAACATCAAGGCTATTTTACTGGACATGATAGTGGCAGCAATTGATACATCCGCTACATCAATTGAGTGGACTTTATCTGAACTATTAAGACATCCAAGAGTGATGAAAATTCTTCAAAATGAGATACAAGATGAAGTAGGAAATAAGAGAATGGTTGAAGAGAAGGATTTGAAGAAGTTGAATTACCTTGATATAGTGGTTGATGAAATCCTAAGACTTCACCCTGTTGCACCCTTACTAGTCCCTCGTGAATCTAGAGAGAGTGTCACGATTGATGGTTATTTCATAGAGAAAAAGACACGAGTCATGGTAAACGCATGGGCTATAGGTAGAGATCCTAATATTTGGTCAGAAAATGCTGAGGAATTTTACCCAGAGAGATTTATTGACAAAAAAATGAATTATCAAGGACATGAGTTTGAATCTATACCATTTGGCTCTGGCCGTAGGCGGTGTCCTGGAATTCAAATGGGTTTAATTACTATTAAGTTGGTTGTAGCTCAATTGGTGCATTGTTTTAACTGGGAACTTCCATATAATATTAGTCCTTCCAATTTGAACATGGACGAAAAATTCGGACTCACAGCACCAAGAGCTCAACATTTGCACGCAATACCACATTATCGTTTGGTTGATGCCAAACATGAATAA 1452 0.3691 MATAITIAIFSFLLFTFIYLLSKISFRAKQNTLHHKKPPGPPTLPIIGNLHMLGKLPHRALETLSKKYGPIMSLQLGQVPAIIISSSKAAELFLKTHDLVFASRPKTQGSELMSYGSKGVAFSEKNELSVLVKTLEKAALVGEVVNVSEAVENLVQDIIYKMILGRSRYEQFDLKKLVQQGLTLIGAFNLADYVPWLGVFDLQGITRGFKKTSKTLDEILEMIIAEHEETSNVDKTRAEDFVDILLSIMHQTIDYESEQNQEVIDRTNIKAILLDMIVAAIDTSATSIEWTLSELLRHPRVMKILQNEIQDEVGNKRMVEEKDLKKLNYLDIVVDEILRLHPVAPLLVPRESRESVTIDGYFIEKKTRVMVNAWAIGRDPNIWSENAEEFYPERFIDKKMNYQGHEFESIPFGSGRRRCPGIQMGLITIKLVVAQLVHCFNWELPYNISPSNLNMDEKFGLTAPRAQHLHAIPHYRLVDAKHE 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01218 483 CDD CYP71-like 67 469 - -
Vifa1g01218 483 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01218 483 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01218 483 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01218 483 PRINTS E-class P450 group I signature 288 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01218 483 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01218 483 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01218 483 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01218 483 Pfam Cytochrome P450 38 126 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01218 483 Pfam Cytochrome P450 127 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01218 483 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01218 483 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01218 483 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01218 483 Coils Coil 302 322 - -
Vifa1g01218 483 SUPERFAMILY Cytochrome P450 38 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01218 483 Gene3D Cytochrome P450 27 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g01218 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Vifa1g01218 483 FunFam Uncharacterized protein 134 472 - -
Vifa1g01218 483 PANTHER CYTOCHROME P450 93A3-LIKE 125 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01218 Vifa-Chr1 198406826 198408472 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01218 38 472 Cytochrome P450 AT3G48310 38.627 2.19e-112 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01218 - - psat:127113357 777.319