Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01203 ATGGATCCTTTCCGACGATTCGAACCCGAACCCGAACCCGAACCCGAAAACCCAATCGCCACATGCCTCTCCATGCTCTCCCTCCGCAACTTCTCCGCCTGCAGCGACTTCGCCCGCCGTCTCCCACTCTCCGATTCCATCGGGCGAATCCTCACAATCGCCGACGTTCTCTCCGCCGCTGATCACTACTCCGTCCTCCGTCTCCCCCGCTCCGAAACCGTCAACCGTGACCTAGCTCGTCAGCATTACGCCAAGTTCGCGATCCTGTTGGACCCTACTGCCACTGACAAATTCCCCTTTCAAGATGAAGCCCTAGCACGTGTCCGTGAGGCCTGGCACGTGCTCTCCGACCCGGAGAAACGCGCTGTTTACGATCACGATATGGGAACTCGCGGCGTTGCTGATGCAACGGCGACGTTTTGGACTGCTTGTCCTTACTGCTGGAATCTGTACCAGTTCGAGAAGAGGTATGAAGGTTGCTCGCTGATGTGTCAGGGTTGTGTTAAGGCTTTTCATGGCGTGGCGGTGAAGCCGCCGGTGAAAGTTGGCGGAACAACGGTGGAAGGAAATGAGCAGCGGCAGTATTACAAGTGTAGGGCTAGAGTGCCGTTGAAGTTTTACGAGGTGAAAGAACCCGGGATGGGTGATAATTCGGCTGAATTTGTGTATGTTTCTGATGATGATGATGGTGATTGGGAGAAAGAATGCGGGAATGTGGACGGTGGTGTGAGGAATGATGATTTGGAGAAGTTCACTGAAGGTCGTGATGATGTTTTTGTCGGGGTTCAGTTTAATGGATGA 801 0.5393 MDPFRRFEPEPEPEPENPIATCLSMLSLRNFSACSDFARRLPLSDSIGRILTIADVLSAADHYSVLRLPRSETVNRDLARQHYAKFAILLDPTATDKFPFQDEALARVREAWHVLSDPEKRAVYDHDMGTRGVADATATFWTACPYCWNLYQFEKRYEGCSLMCQGCVKAFHGVAVKPPVKVGGTTVEGNEQRQYYKCRARVPLKFYEVKEPGMGDNSAEFVYVSDDDDGDWEKECGNVDGGVRNDDLEKFTEGRDDVFVGVQFNG 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01203 266 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 14 212 - -
Vifa1g01203 266 ProSiteProfiles dnaJ domain profile. 61 128 IPR001623 -
Vifa1g01203 266 Pfam DnaJ domain 61 125 IPR001623 -
Vifa1g01203 266 SUPERFAMILY Chaperone J-domain 58 147 IPR036869 -
Vifa1g01203 266 Gene3D DnaJ domain 54 128 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01203 Vifa-Chr1 196666705 196667643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01203 14 206 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 27.434 2.04e-24 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01203 - - tpra:123904328 399.053