Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01181 ATGGACCCTAACCAATATAATTTTCAACAATCTATGTTCCATCTCATACAAAATCAGCAAAATTCTAATCCTCAAAATTCTCAATTTTCCCCACCACCAACAAATTCTATCGTATTTTTTTCGTCACCAAACAATCCAAATATGTATTTTAGACCACAAATAAATACTCATGGGATGAATTTTTCTCATCATGAACCCGAAACACCAAATGGGTTTATGTCCGAACGCCAAGTTCCACAATTTTCAACTCAAGTTGGTATTGAAAATAATACAATTGATAAAGAACAAAGGCGTCCAGTTAAAAGAAAACCTCGAGAGGTATTCACAAGGGAAGAAGATACACTTCTTATGCAATCATGGCTCAATGTTTCAAAGGATCCAATTGTGGGAGTTGATCAAAAAGTCGATAGCTTTTGGTTAAGAATCACCGATAATTATAACCAATATCGTGGGCAGTCACGAGAAAAGCTACAAGGCCAATTAAAATCTCGATGGCATCGAATAAATAGCCTTGTTCAAAAATTTGTTGGGTGTTACAAACAAGCTGTTCATGGAAAAAAAAGTGGGGCATCAGAGAAAGATATCTTAGTCAATGCACATGCTTTTTTTGAACAAGATGAAGGTGCACCATTCAATCTTGAGTATGCATGGAGGCTTTTAAAAGATGAACCTAAATGGATGGGAGCATCCACTGAAAATTCTTCAAAGAGATCAAAGAATTCTACTAGTGGTGCATACACGACATCGCCAAACTCAGAGACACCTTCAAGTTATGAGTTTAACTCATCATCTCCAATGGAGCGTCCTATGGGACAAAAGGCGGCAAAACGAAAAGGTAAGGCAAAGGAAAATACAAATGCAACTGAACCTCCTTCTAGTGTTAATTCTGATACAATGACTAAAAAAATGAATTTAATGGAAAATCTAGCACGGCTTAAGGAGGAAGAAAATAAATTAGTCAAGGAAAAGATGGAGTCTGAAGCACGACTTAAGGAGGAAGAAAACAAATTAATAAAGGAAAAGATGGAGTTTGAAACAATGCAATTCATAATGTCAGACACTTCTAAGATGAATGATAGTCAGCGTGAATTTCATGAAAAACGGTGTAATAACCTAAAAGAAAAATATGGATGGTAA 1137 0.3571 MDPNQYNFQQSMFHLIQNQQNSNPQNSQFSPPPTNSIVFFSSPNNPNMYFRPQINTHGMNFSHHEPETPNGFMSERQVPQFSTQVGIENNTIDKEQRRPVKRKPREVFTREEDTLLMQSWLNVSKDPIVGVDQKVDSFWLRITDNYNQYRGQSREKLQGQLKSRWHRINSLVQKFVGCYKQAVHGKKSGASEKDILVNAHAFFEQDEGAPFNLEYAWRLLKDEPKWMGASTENSSKRSKNSTSGAYTTSPNSETPSSYEFNSSSPMERPMGQKAAKRKGKAKENTNATEPPSSVNSDTMTKKMNLMENLARLKEEENKLVKEKMESEARLKEEENKLIKEKMEFETMQFIMSDTSKMNDSQREFHEKRCNNLKEKYGW 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01181 378 MobiDBLite consensus disorder prediction 228 268 - -
Vifa1g01181 378 Pfam No apical meristem-associated C-terminal domain 210 367 IPR029466 -
Vifa1g01181 378 MobiDBLite consensus disorder prediction 228 298 - -
Vifa1g01181 378 PANTHER - 79 374 - -
Vifa1g01181 378 Coils Coil 295 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01181 Vifa-Chr1 192199882 192201018 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01181 77 316 Glutathione S-transferase Gene Family AT5G41240 31.641 9.75e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01181 - - cam:101493921 391.734