Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g01095 | ATGGGTACCATGAATCATGCCGTGTACATTGCATCTCTTATAATCTCATTAACAATGTGGACGGTAGAATCTAGAATCCCAGGTGTTTACAACGGTGGTGCATGGGAAACCGCTCACGCTACTTTCTACGGTGGTTCAGATGCTTCCGGCACCATGGGAGGAGCGTGTGGTTATGGAAACCTATACAGCCAAGGTTACGGCGTCAACACTGCAGCACTAAGCACAGCACTTTTCAACAGCGGACTCAGTTGCGGTTCTTGCTTCGAACTAAAATGCGCAAACGACAAGCAGTGGTGTCACTCCGGCAGCCCTTCCATTTTCATCACCGCCACAAACTTCTGTCCTCCCAACTTCGCACAAGCCAGCGACAACGGCGGTTGGTGTAACCCTCCTCGTCCTCACTTCGACCTCGCCATGCCTATGTTCCTCAAAATCGCCGAATACCGCGCCGGGATTGTCCCCGTCGCTTATCGGAGGGTTCCGTGCAGGAAGAGCGGTGGAATTCGGTTCACGATTAACGGATTCCGTTACTTTAACTTGGTGCTAATCAGCAACGTCGCGGGTGCAGGGGATATTGTGAGGACCTATGTTAAAGGAACGAGAACTGGGTGGATGCCGATGAGTAGAAACTGGGGGCAAAACTGGCAATCAAATTCTGTTTTGGTGGGTCAGGCTTTGTCTTTTAGAGTTACCGCTAGTGACCGTCGCACTTCCACTTCATGGAACATTGCTCCACAGAATTGGCAATTTGGTCAAACTTTCACCGGGAAGAATTTCCGTGTTTGA | 786 | 0.5038 | MGTMNHAVYIASLIISLTMWTVESRIPGVYNGGAWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNSGLSCGSCFELKCANDKQWCHSGSPSIFITATNFCPPNFAQASDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKSGGIRFTINGFRYFNLVLISNVAGAGDIVRTYVKGTRTGWMPMSRNWGQNWQSNSVLVGQALSFRVTASDRRTSTSWNIAPQNWQFGQTFTGKNFRV | 261 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g01095 | 261 | Pfam | Lytic transglycolase | 70 | 157 | IPR009009 | - | |
Vifa1g01095 | 261 | PRINTS | Expansin/Lol pI family signature | 242 | 256 | IPR007118 | GO:0005576 | |
Vifa1g01095 | 261 | PRINTS | Expansin/Lol pI family signature | 150 | 166 | IPR007118 | GO:0005576 | |
Vifa1g01095 | 261 | PRINTS | Expansin/Lol pI family signature | 34 | 49 | IPR007118 | GO:0005576 | |
Vifa1g01095 | 261 | PRINTS | Expansin/Lol pI family signature | 74 | 92 | IPR007118 | GO:0005576 | |
Vifa1g01095 | 261 | PRINTS | Expansin/Lol pI family signature | 204 | 218 | IPR007118 | GO:0005576 | |
Vifa1g01095 | 261 | PRINTS | Expansin/Lol pI family signature | 52 | 70 | IPR007118 | GO:0005576 | |
Vifa1g01095 | 261 | SUPERFAMILY | Barwin-like endoglucanases | 34 | 185 | IPR036908 | - | |
Vifa1g01095 | 261 | CDD | DPBB_EXPA_N | 35 | 162 | - | - | |
Vifa1g01095 | 261 | PANTHER | EXPANSIN-A15 | 21 | 259 | IPR002963 | GO:0009664 | |
Vifa1g01095 | 261 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 177 | 256 | IPR007117 | - | |
Vifa1g01095 | 261 | FunFam | Expansin | 24 | 163 | - | - | |
Vifa1g01095 | 261 | SMART | dpbb_1 | 70 | 157 | IPR007112 | - | |
Vifa1g01095 | 261 | Pfam | Expansin C-terminal domain | 168 | 245 | IPR007117 | - | |
Vifa1g01095 | 261 | SUPERFAMILY | PHL pollen allergen | 164 | 256 | IPR036749 | - | |
Vifa1g01095 | 261 | Gene3D | - | 167 | 259 | IPR036749 | - | |
Vifa1g01095 | 261 | Gene3D | - | 23 | 163 | IPR036908 | - | |
Vifa1g01095 | 261 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 53 | 167 | IPR007112 | - | |
Vifa1g01095 | 261 | PRINTS | Expansin signature | 92 | 103 | IPR002963 | GO:0009664 | |
Vifa1g01095 | 261 | PRINTS | Expansin signature | 142 | 155 | IPR002963 | GO:0009664 | |
Vifa1g01095 | 261 | PRINTS | Expansin signature | 106 | 116 | IPR002963 | GO:0009664 | |
Vifa1g01095 | 261 | PRINTS | Expansin signature | 178 | 199 | IPR002963 | GO:0009664 | |
Vifa1g01095 | 261 | PRINTS | Expansin signature | 166 | 178 | IPR002963 | GO:0009664 | |
Vifa1g01095 | 261 | PRINTS | Expansin signature | 242 | 258 | IPR002963 | GO:0009664 | |
Vifa1g01095 | 261 | PRINTS | Expansin signature | 213 | 234 | IPR002963 | GO:0009664 | |
Vifa1g01095 | 261 | PRINTS | Expansin signature | 125 | 142 | IPR002963 | GO:0009664 | |
Vifa1g01095 | 261 | PRINTS | Expansin signature | 65 | 79 | IPR002963 | GO:0009664 | |
Vifa1g01095 | 261 | FunFam | Expansin | 167 | 259 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g01095 | Vifa-Chr1 | 179008382 | 179009287 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g01095 | 7 | 261 | Expansin Gene Family | AT2G39700 | 82.031 | 3.95e-162 | 448 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g01095 | - | - | gmx:100809139 | 499.975 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vifa1g01095 | 1 | 179008382 | 179009287 | Vifa6g00756 | 6 | 268735172 | 268736676 | PCT |