Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01073 ATGCCGAGCCACGAAATAAACCAACACCGGTCCAGAACCCGACCGTCAACCTCAACAACCCGTCCACAACCGGTCCAACCACGAATTCCGTTACGGAAGTTACTCCGAATAGCTTCCGTAGCAAGCGGAATTCAATTCGGTTGGGCTCTACAGCTCTCCCTATTAACCCCCTACGTTCAACAGCTCGGCATTCCTCATCAATGGGCGAGCATCATCTGGCTCTGCGGACCGGTCTCCGGTCTATTTGTCCAGCCTTTGGTTGGAGTTCTAAGCGACCGGTGCACGAGCCGGTTCGGGCGACGTAGGCCGTTTATTTTAGCCGGCGCAACGTCGATCGTCGTCGCGGTTGTTATAATCGGTTACGCGGCGGATATTGGCTGGTTGATTGGAGATGATGTTAGCCAGAGTTATCGGCCGTTTGCGATTGGTGTTTTCGTGTTCGGGTTTTGGATTCTTGATGTGGCTAATAATGTTACGCAAGGTCCTTGTAGAGCTTTGCTCGCTGATCTTACCAAATTAGAAGTTTATGAAAAGGTCCAAAAGAATGGAGTACTTGTTGATTCAAGGAGGTGCGGTGCATCACGTTCCTGGTCAGAATTAGTCGGGGATGTTCTTACTGATTGCCTAGATGGTAGTAGTGAGATCAGGGAAAAGCAGATTTACGATTTGTGA 672 0.4985 MPSHEINQHRSRTRPSTSTTRPQPVQPRIPLRKLLRIASVASGIQFGWALQLSLLTPYVQQLGIPHQWASIIWLCGPVSGLFVQPLVGVLSDRCTSRFGRRRPFILAGATSIVVAVVIIGYAADIGWLIGDDVSQSYRPFAIGVFVFGFWILDVANNVTQGPCRALLADLTKLEVYEKVQKNGVLVDSRRCGASRSWSELVGDVLTDCLDGSSEIREKQIYDL 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01073 223 Pfam MFS/sugar transport protein 49 119 - -
Vifa1g01073 223 Gene3D MFS general substrate transporter like domains 31 181 IPR036259 -
Vifa1g01073 223 MobiDBLite consensus disorder prediction 1 25 - -
Vifa1g01073 223 PANTHER SUGAR TRANSPORTER 28 172 - -
Vifa1g01073 223 SUPERFAMILY MFS general substrate transporter 15 151 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01073 Vifa-Chr1 176364365 176365827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01073 4 183 Sucrose Transporter Gene Family AT1G09960 64.481 1.85e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01073 K15378 - tcc:18591885 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g01073 1 176364365 176365827 Vifa1g01073 1 176364365 176365827 ECH