Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01021 ATGGAACAACCTCAACAACAGCAACAACAAAATGATCAGGAAAATGGTGGAGGTGGCAGTAGCGGAAAAGGAAGTGGGTTCAGACAAAGTAGTACAAGGTTAAGACAATACGGTAAGATTGAAGGAAAAAATGTGTTTTATTGGTTTCAAAATCATAAGGCTAGAGAAAGACAGAAGAAAAGATTCACTTCTGATGTTAATGTTCTTCCCATCATTCAAAGAGCACCTAACAATATTTCTATTGCCTCTGCTAATTGGAAACCTGATCATGAACAACAACAACAATCCATTCTTCACACCAACCATTCCAATTACAACATTTCAAAAGAAACTAAGCTAACATTGCGCGAACCGCATCATGCACATAATAAAACGGCGGACGACGTGGACGAAAGCAGTTGGATGGCGAACGACGACGTGGACGACGAACACGGCGTGGCAGTTGGACGGAGTGACGAAGAACACGGCGGAGGGTGTGAACGAAAGAGGTTTGACTCGGAGCGGAAGGACGGAGCGTCTAGGTTCGGCGAAATGTGA 537 0.4395 MEQPQQQQQQNDQENGGGGSSGKGSGFRQSSTRLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDVNVLPIIQRAPNNISIASANWKPDHEQQQQSILHTNHSNYNISKETKLTLREPHHAHNKTADDVDESSWMANDDVDDEHGVAVGRSDEEHGGGCERKRFDSERKDGASRFGEM 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01021 178 MobiDBLite consensus disorder prediction 116 178 - -
Vifa1g01021 178 MobiDBLite consensus disorder prediction 116 131 - -
Vifa1g01021 178 SUPERFAMILY Homeodomain-like 30 64 IPR009057 -
Vifa1g01021 178 Pfam Homeodomain 34 58 IPR001356 GO:0003677
Vifa1g01021 178 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 31 127 IPR044555 GO:0003700|GO:0099402
Vifa1g01021 178 MobiDBLite consensus disorder prediction 1 35 - -
Vifa1g01021 178 MobiDBLite consensus disorder prediction 138 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01021 Vifa-Chr1 169022971 169023963 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01021 31 83 Wox Gene Family AT2G17950 62.264 4.96e-16 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vifa1g01021 Homeodomain 2.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01021 - - zju:107424391 90.1225