Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00989 ATGAGAAATATGAGAGACACTGAGAGAATGGAAAGTGTGAAAAAGTGGTTCATGTCTTCTCAAGCTTTTCTAAGCATGCTCTTAGTGCAAGTTTTTGCAACTGGAATGCAACTTTTGTCCAGGATCATTTTGGTTCAAGGAAGTTATATTTTTGCAATTACTACTTATCGCTATATTGTAGCTGCTATTTGCGTTGCACCATTTGCACTCTATCTTGAAAGAGGACTAGTAAAGAAGTTCAATTGGAGAGTTTGGTTATGGCTTTTCATTAATGCAATGATTGGGGGTTTTGAGTTGGTGTTAGGCCTAAAAGTAAACTTCAGGAAAAGTCAGATCTTCGGTATTTATGTCAAGGATTACATGATGAATGTTGCCTCTTCTTTTTTGGCTTGCAAAATAGGTTCTTTTCCTTTCAAGTTTCTCGGAGTGAAGATGGGAGACAGCCCGAGGAAAGCCAATATGTGGAGCGATGTAGTGGATAATATGAGGAGAATGCTTTCTAGTTGGAGGAGTAGACATTTATCTTTGGGTGGTAGAGTGGTGTTGATAAACTCGGTTCTTAATTCATTACATTTGTACTATATGTCATTCTATAGAGCACCTTGTAAAATGATTAACTTGATCAAGAGCATCCAAGCGAGTTTTTTATGGGGGGTTCAGATTCTAGGAAGAAAGTACATTGGGTTGGTTGAGACAAAGTGTGTCGAAAGACAAAGGGGACCTCGGCATCAAGAACTTAGATACTTTCAAAAGTGTGATTCTATTTGGTGGAGGGATTTGATCACTCTTGATGCCAAAGTTGGTATGGATAGAAACATTTTCTCCGATAATCTGAGTTACGGGTTGGGATATGGTAGGGGATTGCATTCTGGCATAATAAATGGGTGGGAAATTAATGACCACATGCTTATTCTTGTGGTTGAGGATAATTTCGTCTGGGAAATCGATGACACAAAGAATTTTTTGGTTCAGTCTTGTTATGGTGCCTTGCGAACGAAGATTGTAATCACCTTTTCTTCGATTGTGGAACTTCCAAGAGAATTTGGAATATTATTCTTAAGTGGACTAGATGGAGTAGTGGTAGCCAAATCTGGAGCTTGGAGTCATTCATGTTCCATTGTCATGAAAGGCGGTATGCAGAAGGCAAATGTATTCTATCTATTATTTGGTTATCAACTGTGTGGAATCTGTGGATTATTAGGAATGTTATTCTTTTTAAAGGATCTGTGTTCAATTTTGAGGACTTCATTTTATCAATTAAGTTTCTGTCTTGGAGATGGTCCTGTTTAG 1290 0.3798 MRNMRDTERMESVKKWFMSSQAFLSMLLVQVFATGMQLLSRIILVQGSYIFAITTYRYIVAAICVAPFALYLERGLVKKFNWRVWLWLFINAMIGGFELVLGLKVNFRKSQIFGIYVKDYMMNVASSFLACKIGSFPFKFLGVKMGDSPRKANMWSDVVDNMRRMLSSWRSRHLSLGGRVVLINSVLNSLHLYYMSFYRAPCKMINLIKSIQASFLWGVQILGRKYIGLVETKCVERQRGPRHQELRYFQKCDSIWWRDLITLDAKVGMDRNIFSDNLSYGLGYGRGLHSGIINGWEINDHMLILVVEDNFVWEIDDTKNFLVQSCYGALRTKIVITFSSIVELPREFGILFLSGLDGVVVAKSGAWSHSCSIVMKGGMQKANVFYLLFGYQLCGICGLLGMLFFLKDLCSILRTSFYQLSFCLGDGPV 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00989 429 PANTHER REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED 88 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00989 Vifa-Chr1 165272345 165279578 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00989 8 95 Nodulin-like Gene Family AT5G07050 28.409 2.17e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00989 - - tpra:123891844 144.821