LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa1g00987	ATGACAATGTCTGTAGAACTATTTTACTTTGGTCTTCGAGACACGACTGCTACTTACTCTGTCAACTTCCTTAATTTAATCCCTATTTGCACATTCTTGATCTCTATCATAGTCAGGATAGAGAATCTAAGAATTGAAACATGGAGTGGTAAAGCCAAGTGTCTTGGGACAATTGTGTGTGTTGGTGGGGCATTAGTTACAAGTCTTTACAAAGGAAAGGAATTTTATATTGGTCAACATCACAATCACCATATTAATAATATTGTGGTTGCAACACACAAAACTCACATGCTTCGTGGAACTTTGTTTTTAATTGGATCTTGTTGTTCTTACACAACTTGGTTTATTATGCAGGTTAAGTTGGTTAAAGTATTTCCATTGATGTATTGGGGAACAATGCTATCATGCATTATGGCCGCAATTCAGTCAGCAGTAATCGGTACATTCATAAATTCTAGTAAAGAATCTTGGAGGTTAGAGTGGAATCTACAACTTATTACTATACTATACTCGGGAGCATTGGCTACTGCTGCTACTTTTTGCTTACTATCATGGACAATTACAATCAAGGGACCTACTTATCCTCCAATGTTCAATCCACTTGCTCTAGTTTTTGTTGCAATATCAGAGGCTATTGTACTGGGCGAACCACTAAGAATTGGAACGTTATTGGGCATGATTTTCATCATTGTAGGATTATATTACTTTTTATGGGGCAAAAAGAATGAGATGCCACGTCTATCTCAAACAAATGTAGCAGCTTCAGAATTATCAATAACTATGGCTGGTGATCCTACTGTGCCTAAATCAACAACAATTGTAGCACTGAATTCTTCACCTGATGAGAGTATACCATGA	858	0.3671	MTMSVELFYFGLRDTTATYSVNFLNLIPICTFLISIIVRIENLRIETWSGKAKCLGTIVCVGGALVTSLYKGKEFYIGQHHNHHINNIVVATHKTHMLRGTLFLIGSCCSYTTWFIMQVKLVKVFPLMYWGTMLSCIMAAIQSAVIGTFINSSKESWRLEWNLQLITILYSGALATAATFCLLSWTITIKGPTYPPMFNPLALVFVAISEAIVLGEPLRIGTLLGMIFIIVGLYYFLWGKKNEMPRLSQTNVAASELSITMAGDPTVPKSTTIVALNSSPDESIP	285

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa1g00987	285	PANTHER	WAT1-RELATED PROTEIN	2	250	IPR030184	GO:0016020\|GO:0022857
	Vifa1g00987	285	Pfam	EamA-like transporter family	99	237	IPR000620	GO:0016020
	Vifa1g00987	285	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	161	241	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa1g00987	Vifa-Chr1	165254785	165257474	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vifa1g00987	7	241	Nodulin-like Gene Family	AT1G09380	37.083	2.29e-49	166

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa1g00987	-		-	psat:127112970	496.893