Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00974 ATGAGGAAGATGATTGTTGGATGCCCTCAACTACTTGCTTTAAACATTGATATCATGAAACTTAGCTTTGATTTCTTCCAAAGCGAGATGGAACAGCCTTTAGAAGACTTGGTTGAATTTCCAGCATTCTTCACTTATGGTTTGGAGTCAACTATAAAACCTAGGCATAACATGGTTGCAAAGAAAGCATTGAAGTGTTCGCTGGCATGGATGCTTAATTGTTCAAATGAGAAATTTGAGCAGCGGATGGATTATGACACTATTGACATGGAAGAGATGGAAATGAAACCATCGTTTGACATGGATTCATTGATGCGACCAAGGAATGATGAATCGGATTCTGATTATGAATACAGTGATTCTGACGATGTTGATGACGAGTAA 384 0.3828 MRKMIVGCPQLLALNIDIMKLSFDFFQSEMEQPLEDLVEFPAFFTYGLESTIKPRHNMVAKKALKCSLAWMLNCSNEKFEQRMDYDTIDMEEMEMKPSFDMDSLMRPRNDESDSDYEYSDSDDVDDE 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00974 127 Pfam mTERF 2 80 IPR003690 GO:0003690|GO:0006355
Vifa1g00974 127 PANTHER CGI-12 PROTEIN-RELATED 2 83 IPR003690 GO:0003690|GO:0006355
Vifa1g00974 127 MobiDBLite consensus disorder prediction 96 114 - -
Vifa1g00974 127 MobiDBLite consensus disorder prediction 96 127 - -
Vifa1g00974 127 SMART mt_12 34 65 IPR003690 GO:0003690|GO:0006355
Vifa1g00974 127 SMART mt_12 2 33 IPR003690 GO:0003690|GO:0006355
Vifa1g00974 127 Gene3D Transcription termination factor 3, mitochondrial 1 89 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00974 Vifa-Chr1 163852547 163852930 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vifa1g00974 mTERF 1.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00974 K15032 - gmx:100785223 196.823