Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00926 ATGGATCCTGAAAAATCAATAGAGGAACAATTCTCTAAGCTACATCCTTCATTGCCGGTAAACACCAGAATCGGAATAGTAGGTGCCGGTCCAAGTGGCATATCAGCTGCCTATGCATTGGCAAGGCTTGGTTACAATAATATCACTGTCTTGGAGAAACACCATGCAGTTGGTGGCATGTGTGAATCAGTAGAAATTGAAGGAAAAGTTTATGACCTGGGTGGGCAAGTTCTGGCCGCAAGCAGTGCTCCTGTAATCTTTCACTTGGCAAAAGAGACGGGTTCTGCACTCGAAGAATTGGACTCCCACAAGCTTGCTGTTATCGACACTTCCTCGGGAAAATACCAAGATATTAAAGTTGCTGATGATTATGTATCTGTTATTTCACTCACATTGAAAATCCAAGAAAAGGTGGAGAATTCCGGTCGCTTTGGGATCCATGCTGTCAGTGAAGTTGCGGCAGACTTAACTCCGGAATATCTTGAGCGTCATGGACTCAAATCAGTTCCTAAATCTGTTGCATTTAGTTATACTGCTTCCGGATATGGATTCATACAAGACATGCCTTATGCCTACATTCATGAATTTACCAGAACATCCATGGCTGGAAAGATTCGACGATTTAAAGGTGGATATACCAGTCTTTGGCAGAAGATTGCTGAATCACTTCCTATAAAACTTCACTGTAACACTGAAGTTTTGGCAATAAGGCGTAACTCTGACAGTGTCGCTATTAATGTTAAAAGCTCAACTGAAGTTGAAACTCTGGAGTTTGATAAGATTGTAGTCTCCGGTAACTTTCCATTAAAATATGGAAGAACTTACAGATCAGAACCTTCAACTTGCATAGATTGTGACGCTGAGGTGATGGATGCTAGTGACATTGAAAAGGACTTATTCAGCAAAGTAGAGACAAATGACTACTACACCACTGTTTTTAAGATCAAAGGGCTAGATCATATGCCAGTTGGATTTTATTATTTTAATGAGTATATGGAAGATCCGAGTACGATCGGAAATCCAGTTGCCATGCAGAAGTTTTACGCCGACTCTGATATATTCTTGTTCTGGTCTTACGGAAACTCCTTTGATATTAAAGGGCCAACTATCACTGAGCTAGCAATCAAGGCAATAGAAGCAGTGGGAGGAGAAGTTGAGAGCTTCATACTTCAGCGCCGCTTTAAGTATTTTCCTCATGTTAGCAGCCAAGATATGAAAAACGGGTTCTATGAAAAGTTGGAATCAGAGCTCCAAGGTTCAAGGAATACATATTATGTCGGTGGACTTATGGCATTTGAGCTCACAGAGAGAAATTCTTCATATGCCATGGCTCTTATGTGCAAGAACTTTGCAAATAGCAGTGATTTGCCAGTGTTTCCTTACACTAAGAGTTTGTTTCCTTTGCAAACCGAGTTTCAGAGAAAGGAACCTAAAGAACTAGCTGAATTGCCCGGTGTAGAATTTCCCGACTTGCCTACTTTGAATAGCTATTTAAAGCACTGGGGAACTCATGGAGTCACTCAAGACAGAACCCTTTATAGTTGGATAAATGAAGAAGGGATAGTGATAGGTAAGAGGACATATAGGGAGCAACATTTAAGAACCTCTTGCATTGCAAGTAAGCTCTTAAAAAGCCAAAAGCCCGTTATCAAACCTGGTGACAAGGTTCTTCTAGTCTATGTTCCCGGCCTAGATTTCATTGATGCATTCTTTGGATGCCTAAGAGCTAAAGTTATACCAGTTCCGGTTCTTCCCCCAGATCCCATGCAAAGAGGTGGACAAGCACTTTTAAAAATTGAGAACATTGCCAAATCATGTGGCATAGGGGCAATTTTATCAACAGTAGCTTATCACTCAGCAGTCCGTGCAGGTTTAGTGAAAAATTTCATCACATTGAAAAATGGGAAATCCTCAGGTCGGTGGCCAAGTCTTCCGTGGCTGTACACTGATACTTGGGTCTATAACTCAAGAAGTTCTTCTATGGAGGATCAATATAATGATCAGCGTGAATCTCAGCCTGGTGATATATGTTTCTTGCAGTTTACTTCAGGCTCGACCGGTGATGCTAAAGGAGTCATGATCACTCATGGAGGACTGATTCACAACGTTAAGCTGATGCAAAGTAGGTACAAGAGCACCTCGAGGACAGTACTAGTGAGTTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGAGGACTTTTTACAGCTCTTGTCAGCGGTGGAACTGCGCTTCTGTTTTCACCAATGACATTCATCAAGAAACCACTCTTATGGATAGAAACCATGAGCAAGTATCAAGCAACTCACAGTGCTGGACCTAACTTTGCTTTTGAGTTAGTCATCCGAAGATTAGAGTCTACTGACAAGGATAAACTTCAGAATCTAGACCTTTCATCCATGATTTTTCTTATGGTTGCTGCTGAACCAGTGAGACAGAAGACATTGAAAAGATTTCTTGAGCTAACCGGTCCCTATGGCTTGTCTCAGAAAGCGATGGCTCCTGGATATGGCTTAGCAGAGAATTGTGTGTTTGTCAGTTGTGCATTTGGAGAAGGAAGTCCTATTCTTGTTGACTGGCAAGGACGAGTTTGTTGCGGATATATTCATCAGGGGAATGCAGACATTGACATCAGAATTGTTGATCCAGATGGCAGTGAAGAGCTTCAGGAAGAGGGAAAGGAAGGTGAAATCTGGATCAGTAGTCCAAGTGCAGGAATAGGATACTGGGGGAAGGAAGAATTGAGTCAGAAAACTTTTCAAAATCAGCTTCCGAACCATCCTGGACGTGTCTACACAAGAACTGGAGACTTGGGGAGGATAATAGATGGAAAATTATTCATCACTGGAAGAATCAAGGATCTTATCATTGTTGCTGGAAGAAATATCTATTCCTCGGATGTTGAAAAGACAGTCGAAAATTCGTCTGAATTTCTTCGTCCGGGATGCTGTGCTGTCATTGGTGTCCCTGAAGAAACTTTATCGGCAAAAGGGATTTCCTTGCCAGATGGTTCTGATCAGGTTGGCTTGGTTGTGATTGCAGAACTAAGGGATGGTAAACCAGTTAGCAAAGATGTGGTTGAAGATATTCAGGCACGCGTGGCCGAAGAACATGGAGTAAATGTTGCTTCTGTCAAGTTGATCAAGCCTAGAACCATCAGCAAAACAACATCAGGAAAAATTAAAAGATTTGAATGTCTCAAACAGTTTGCAGATGGAACACTGAATTTGGTACCACAACCCGTTCTGACAAAGAAAACACTGGTAAGGTCATTCACTACAGGAACATGTCAAGAAGGAAGGACACCCCGGGCGCGGCTTGCGAAAAGTGCATCTCTAAGTAGTCCAAGAATCAGTACCAAGGAAATTCTGGAGTTCTTGAAAAAGCTTATTTCTGAGCAGGCTGGAATCTCGGTAAGCAAAATCTCTGTCACAGACAACATGTCAACCTATGGAATTGATTCCATTGGTGTGGTGAAAGCAACTCAAAAACTCTCTGATTTCCTCGGAGTTCCAGTTGCAGCTATAGACGTTTTCAGTGCATCCTGCATTCAAGAATTGGCCAACTTCTCAGAGAATCTTCTGTTGAAGTCTCAACCTCACCATACGAGCAATCCATCCTTTGCTCCAGAAGATGAAACCGAATCTACTGAATTTGTCGTGGATGTGTCCAAGTCTCATCAATGGAGTATATATGCACTTCAATCTTTAGCACTTGTTTTCATGTCTATCCTTTTGGTTTCTCCTGCTTATCTATCCATCACTACTTTTCAAAGTCTCATCGCAAGTGTTGATAAGTCAGCGTACGGAATTCCTTGGTCAAACTATCTAATTTCCCTTGCTTTGGCTCCACTTTCTTGGATCCTTTGCATTGCTTCTACATGCATTTGCATTTCATTTTTCGGAAACTCTTTCTTGAGGCCAAATTATGCTCTTACTCCTGAAATATCTATATATTCAATGGCCTTTGTCAAGTGGTGGGCACTTTATAAAAGCCAGGAAATTTCATCCAAAGTTCTGGCCACACACCTCAAAGGAACTGTGTTTCTGAAGTACTGGTTTGAGATACTTGGCGCAAGAATTGGATCCTCAGTTTTGCTTGACACAGTCGACATCACAGACCCGTCGCTGGTTTCAATTGGAGATGAAGCTGTCATTTCTGAAGGGGTTCTGGTTCAAAGCCATGAGGTTAAGAATGGAATTCTAAGTCTCCATCCTATTAGGATCGGCCGGAATTCTTCCATTGGACCTTATGCTGTTATTCAAAAAGGAAGTGTTGTTAAAGAAGGAGCTGAGATACAACCACTACAAAAGGTTGAAGGGGGCCAACATGTGCTCAAGCCTACAAAATTTAATAATGTTAAAGAGAATGCAGTGTTGCTTGTTACTACCAATAAAACTGAGTCTGAAACTATATACCACTTTCTGGGGATTTACCTTGTTGGCTTCCTTAGTTCCCTTGCTGCAGCTATTACTTACTTCATGTATACATGGTTCTTCCAAAAACCCGTTTCATTCCAAAGTTTTTCATTTGTGTGCGTATGTGGAGCCTTCCATTGGATACCATTCACTATTACTGCCTATGCTACAATGTTTTCTAATGTACCATCAAATGCCATTACCTTTGCCATTTCATTTGCATGTGCATACTTGCTTCATGGTCTCATACTAACCTCTCTCACCTGTTCTTTGACTCGTTTACTGAAAAGTCAAAATCAAACTCACTTCAAAACTTGGCTCCAAAACCAACTGACCCTTTCCTGCCACCTCAGATTTGCAAAGCTTCTCTCAGGAACAGAACTCTTCTGCATATACTTACGCCTTCTAGGTGCAAAAATTGGCAAGCATTGTTCCATTAGAGCCATTAATCCAGTTTCAAACCCTGAGTTAATGTCAATTGGTGATGGTGTTCATCTTGGTGACTTTAGCCGCATAATCACTGGTTTCAATTATTCCAATGGATATGCTTGTGGAAAAATAGAGGTTCAAGATAATTCAGTTGTAGGTAGTCAAAGCATAATTCTCCCTGGTTCTCTTGTTGAAAAGAATGTCATTCTAGGTGCACTTTCTGTTGCTCCAATGAACTCTATACTCCATGAAGGTAGTGTTTACATCGGATCTCAAACCCGAGTTACGACGAGGAACTCAGGAAGTGCAAATTTTGATGAAAGAATTGAGGAGATGGACATGGACTACAAGAAAATAGTTGCGAATTTGGCTGCAAATCTAGCTGCAACAACTATGAATGCTAAAGCAAGATATTTCCATCGCATCGGTGTTGGTGGAAAAGGGCAATTGAAAATATACGACAAACTTGAAGGTGTTCCAATGCACAAGATTTTTCACCCTGGCAAAAGTTACCCTATCTTAGTAAGACATAGTAATAGCTTGAGTGCTGATGATGATGCAAGAATCGATGCACGTGGTGCTGCATTGAGGATACTTTCTGATGAAGAACCTGCTACAGGCTCTTCTGATTCTCCTCCTCCTACTCTCATTGACTTAACACTGAAAACAGGAAATGCATTTTATGCTCGAACACTTTCTGATTTTGCCAGCTGGCTTGTGTGTGGACTTGCTGCAAGGGAAGAACTAGTAAAGGGTGCTCCACATGTCCGTGAAGCAGTGTGGAGTTCCCTTAGACACGCCGATTCATATGCCGAATTGCATTACTTTTCAAACTATTGCAGGCTCATGCGGTTCGAAGACGGACAACAAATGTATGTGAAATTCAAGTTAAGGCCATATGACACAAGCATCAATGAAGACAGAGGTAAAGTTATTCCAACAGGGATTCTTCCACCCGAGACAGGTGCGATTCCTAGAGACGAAAATGATTCACGTCCTTTGCTTTTCCTTGCTAACGATTTTCAAAACCGTGTTAGTTCCTCAAATGGAGTTTGTTATGTTTTCCAAATTCAACTAAGACCAGTTCCAGACAACGAACAAGCCCGCGAGATTGCATTGGATTGTTCTAAACCATGGGACGAAAACCAATTCCCTTTCATTGATGTTGGAGAGATAAACATCAATGAGAATCTCTCAATGGAAGAATCACAAAAGCTTGAGTTCAATCCATATCTTAAAAGCAATGAATTGGATGTGATTTCAGCTACTTCCAACACACAAAGTGCTTCAATCGATCACGGCCGTTCATTAATCTACGAGATTTGTCAGCATGTCCGCAACAGACAACCACTCCAAGAAGCTTGGAGAAACCTCGTACAACAATCCAATGTCAAGGTTGACCTGTCCTGCTGTCCAATAGCATCATCACCACCACCATTGCCTGAAAAAGAACCATTACTGAAAAACAAAACTCCACAAAAATTAACATTAACAAGAACATGGTACCAAACATTCTCAGCACTCTTCATTCAGCCATTTCTACAAACAGCTTTACCTCACATGGTAATTGGTCTATCCATTTACCTTCCTCTGAACATGGTTGTTTATTTTAAGGATGCCAAGAAACTTCCACTCCATTGGCTACTTCCATTCTTCTGGATTCTCTCAGGTCTCATATCTGCATTATCATGTGTTATAGCAAAAAGGGTTCTTGTAGGAAAAAGGAAAAGTGGTGAAACAATCCCAATATGGAGCAAAAGAATCATAATGGACACAACATGGCAAGCTATTAGAACATTGGTTGGTGATTACTTCATGGATATGACAAATGGGTCATTTATATTTGTGATTTGGATGAAAATGATGGGTGCAGAGATTGACATGGATGGTGGTACTTATGTGGATAGCAATGGAGCAATGTTGAATCCTGAAATGGTGAAGATTGAGAGAGGGGGTTGTGTGGGAAGGGAGGCATTGTTGTTTGGACATATATATGAAGGTGAAGAAGGTGGAATGGTGAAATATGGAGAGATTAAGATTGGGGAAGATGGGTTTGTGGGGAGTAGAAGTGTGGTTATGCCTGGTGTGGAAGTTGAGAGTGATGGAAGTCTTGCTGCTTTGTGTCTTGCTATGAAAGGAGAAATTGTTAGGTCAAGATAG 7008 0.4134 MDPEKSIEEQFSKLHPSLPVNTRIGIVGAGPSGISAAYALARLGYNNITVLEKHHAVGGMCESVEIEGKVYDLGGQVLAASSAPVIFHLAKETGSALEELDSHKLAVIDTSSGKYQDIKVADDYVSVISLTLKIQEKVENSGRFGIHAVSEVAADLTPEYLERHGLKSVPKSVAFSYTASGYGFIQDMPYAYIHEFTRTSMAGKIRRFKGGYTSLWQKIAESLPIKLHCNTEVLAIRRNSDSVAINVKSSTEVETLEFDKIVVSGNFPLKYGRTYRSEPSTCIDCDAEVMDASDIEKDLFSKVETNDYYTTVFKIKGLDHMPVGFYYFNEYMEDPSTIGNPVAMQKFYADSDIFLFWSYGNSFDIKGPTITELAIKAIEAVGGEVESFILQRRFKYFPHVSSQDMKNGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMALMCKNFANSSDLPVFPYTKSLFPLQTEFQRKEPKELAELPGVEFPDLPTLNSYLKHWGTHGVTQDRTLYSWINEEGIVIGKRTYREQHLRTSCIASKLLKSQKPVIKPGDKVLLVYVPGLDFIDAFFGCLRAKVIPVPVLPPDPMQRGGQALLKIENIAKSCGIGAILSTVAYHSAVRAGLVKNFITLKNGKSSGRWPSLPWLYTDTWVYNSRSSSMEDQYNDQRESQPGDICFLQFTSGSTGDAKGVMITHGGLIHNVKLMQSRYKSTSRTVLVSWLPQYHDMGLIGGLFTALVSGGTALLFSPMTFIKKPLLWIETMSKYQATHSAGPNFAFELVIRRLESTDKDKLQNLDLSSMIFLMVAAEPVRQKTLKRFLELTGPYGLSQKAMAPGYGLAENCVFVSCAFGEGSPILVDWQGRVCCGYIHQGNADIDIRIVDPDGSEELQEEGKEGEIWISSPSAGIGYWGKEELSQKTFQNQLPNHPGRVYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSSDVEKTVENSSEFLRPGCCAVIGVPEETLSAKGISLPDGSDQVGLVVIAELRDGKPVSKDVVEDIQARVAEEHGVNVASVKLIKPRTISKTTSGKIKRFECLKQFADGTLNLVPQPVLTKKTLVRSFTTGTCQEGRTPRARLAKSASLSSPRISTKEILEFLKKLISEQAGISVSKISVTDNMSTYGIDSIGVVKATQKLSDFLGVPVAAIDVFSASCIQELANFSENLLLKSQPHHTSNPSFAPEDETESTEFVVDVSKSHQWSIYALQSLALVFMSILLVSPAYLSITTFQSLIASVDKSAYGIPWSNYLISLALAPLSWILCIASTCICISFFGNSFLRPNYALTPEISIYSMAFVKWWALYKSQEISSKVLATHLKGTVFLKYWFEILGARIGSSVLLDTVDITDPSLVSIGDEAVISEGVLVQSHEVKNGILSLHPIRIGRNSSIGPYAVIQKGSVVKEGAEIQPLQKVEGGQHVLKPTKFNNVKENAVLLVTTNKTESETIYHFLGIYLVGFLSSLAAAITYFMYTWFFQKPVSFQSFSFVCVCGAFHWIPFTITAYATMFSNVPSNAITFAISFACAYLLHGLILTSLTCSLTRLLKSQNQTHFKTWLQNQLTLSCHLRFAKLLSGTELFCIYLRLLGAKIGKHCSIRAINPVSNPELMSIGDGVHLGDFSRIITGFNYSNGYACGKIEVQDNSVVGSQSIILPGSLVEKNVILGALSVAPMNSILHEGSVYIGSQTRVTTRNSGSANFDERIEEMDMDYKKIVANLAANLAATTMNAKARYFHRIGVGGKGQLKIYDKLEGVPMHKIFHPGKSYPILVRHSNSLSADDDARIDARGAALRILSDEEPATGSSDSPPPTLIDLTLKTGNAFYARTLSDFASWLVCGLAAREELVKGAPHVREAVWSSLRHADSYAELHYFSNYCRLMRFEDGQQMYVKFKLRPYDTSINEDRGKVIPTGILPPETGAIPRDENDSRPLLFLANDFQNRVSSSNGVCYVFQIQLRPVPDNEQAREIALDCSKPWDENQFPFIDVGEININENLSMEESQKLEFNPYLKSNELDVISATSNTQSASIDHGRSLIYEICQHVRNRQPLQEAWRNLVQQSNVKVDLSCCPIASSPPPLPEKEPLLKNKTPQKLTLTRTWYQTFSALFIQPFLQTALPHMVIGLSIYLPLNMVVYFKDAKKLPLHWLLPFFWILSGLISALSCVIAKRVLVGKRKSGETIPIWSKRIIMDTTWQAIRTLVGDYFMDMTNGSFIFVIWMKMMGAEIDMDGGTYVDSNGAMLNPEMVKIERGGCVGREALLFGHIYEGEEGGMVKYGEIKIGEDGFVGSRSVVMPGVEVESDGSLAALCLAMKGEIVRSR 2335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00926 2335 SUPERFAMILY FAD/NAD(P)-binding domain 21 271 IPR036188 -
Vifa1g00926 2335 Gene3D - 480 952 IPR042099 -
Vifa1g00926 2335 Gene3D - 23 445 IPR036188 -
Vifa1g00926 2335 SUPERFAMILY Trimeric LpxA-like enzymes 1597 1713 IPR011004 -
Vifa1g00926 2335 ProSitePatterns Putative AMP-binding domain signature. 679 690 IPR020845 -
Vifa1g00926 2335 ProSitePatterns Phosphopantetheine attachment site. 1150 1165 IPR006162 -
Vifa1g00926 2335 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 131 2082 - -
Vifa1g00926 2335 PRINTS Adrenodoxin reductase family signature 47 60 - -
Vifa1g00926 2335 PRINTS Adrenodoxin reductase family signature 23 45 - -
Vifa1g00926 2335 SUPERFAMILY Trimeric LpxA-like enzymes 1344 1442 IPR011004 -
Vifa1g00926 2335 Gene3D - 94 202 - -
Vifa1g00926 2335 SUPERFAMILY Trimeric LpxA-like enzymes 2181 2328 IPR011004 -
Vifa1g00926 2335 CDD FAAL 509 1072 IPR040097 GO:0008610
Vifa1g00926 2335 Gene3D Catalase core domain 1710 2072 - -
Vifa1g00926 2335 Pfam Phosphopantetheine attachment site 1126 1190 IPR009081 -
Vifa1g00926 2335 SUPERFAMILY Acetyl-CoA synthetase-like 493 1081 - -
Vifa1g00926 2335 Gene3D Hexapeptide repeat proteins 1357 1461 - -
Vifa1g00926 2335 Gene3D - 303 396 - -
Vifa1g00926 2335 SUPERFAMILY ACP-like 1118 1209 IPR036736 -
Vifa1g00926 2335 Gene3D - 953 1081 IPR045851 -
Vifa1g00926 2335 Pfam AMP-binding enzyme 525 958 IPR000873 -
Vifa1g00926 2335 Pfam Flavin containing amine oxidoreductase 32 265 IPR002937 GO:0016491
Vifa1g00926 2335 Gene3D Hexapeptide repeat proteins 2201 2328 - -
Vifa1g00926 2335 ProSiteProfiles catalase family profile. 1709 2335 IPR018028 GO:0004096|GO:0006979|GO:0020037
Vifa1g00926 2335 Gene3D Hexapeptide repeat proteins 1589 1709 - -
Vifa1g00926 2335 SMART Phosphopantetheine attachment site 1124 1195 IPR020806 GO:0031177
Vifa1g00926 2335 Gene3D - 1111 1194 IPR036736 -
Vifa1g00926 2335 ProSiteProfiles Carrier protein (CP) domain profile. 1121 1195 IPR009081 -
Vifa1g00926 2335 SUPERFAMILY Heme-dependent catalase-like 1725 2064 IPR020835 GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00926 Vifa-Chr1 156357875 156365517 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00926 668 991 Monolignol Biosynthesis Gene Families AT1G20480 26.687 1.97e-18 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00926 - - pcin:129313184 3576.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00926 1 156357875 156365517 Vifa1g00926 1 156357875 156365517 ECH