Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00917 ATGGGTTTGAATTCAAGGGACATTAAACTTCATGTATTCAAAGTTCTTCATCTTTCAATTGAAAAAAGCTATGATTTTATGAAAAAGCATCCAAGAATTTCAGGTGCTATGTTAGTTTTCTTCATCATGTATATATTTCTTTCTTGTATATACAATTTGTTGGTTTTCTTGTCTCCATTTCTCGTGTTTACCGCAATTTTGGTTACACTCTTTTGGAGTTCGGAGCAAACACATATCAAATGTGTTGAGAAAAAAGAAAAGGAAAAAAAGGTTGATGCAAAAAATCTATCTAATGTTTACACGAAAGATAGACGCGGAATGCTTTATAAGTATCCATCACAAAATGCAACGAGTAGAAGAAGAAATTTTACGGGAAAGAAATTGGATGTGTATGGTGATTTAGAACAAAAAGCTAAGAATTTATCAGCAGTGTTTCGAAACGAATTCACTAAAAAGAACACGGATATTAGATCAGGAAAAATATTTTTCGACAAAGAGATGGACCCTTATTTCGATTCTAAGTTTACATCAAGAAAAGTTGATGTTCCTCTAAAACAAACATTACATGCTACTCAACCCTCAATGGTTGATCTTGTTACTTGTAACACAAGTTATTATGATTGTCAAGAGACGAATATAGAAAAAACAGAAGAGGAGAAAAAGGCAATAGAGGATAATAGTATTGGTAACAATAAAGGTGTAGAACTTAAAGAGGATGATAAAAAAAAGCTAATGGATCTTGGGATTTGTGAGATGGAAAGAAACAAAAGATTAGAGAGTCTTATTGCTAGAAGAAGGGCAAGAAAACAATTGAATTTGGAGATTGAAAATGGTTTAATTGATATTGAATCAATCACACCAAATCAAATTTCACCATTGCTTGTTGCAAGAATGGACCCTTTTGATTCTCTAATATATTTTGAAGATATAGAAATGCCAGGTTCCGCTCCGTCTACTTTGAGAAGTCCATTTGATATTCCTTATGAACCTTTCGAGGAGAAACCAAATCTCAAAGGGGATATTTTGGATCATGAATTCACAACCAACACGCCGTTAGAACCTAAATATGACCTTCTACAACTTAAAGAGCATAGACTACCAAGTTCAAGAGTTAGAAGGCTTTCAGGTTTGGCAAATCATGATGGTCTGGAAAAGTTAAACTCCTTAGAAGGATGTGAAAGTAAATTACAAGCTCCCAATCCGTCAAATGAAGGAGAGGAAACCACACACGATGACAAAGGAAAATGCAAACTCGATATTGTTGGCATGCAAAGTGAGGAAGAAAACAAAAATGATCCAACAATAACAAATATCGAAGAAGTTATAAATTTAACTTCTAATCCTCAAGACGAGTTTCTTGATTTTCCGTTATCTAGTACTAATGTTACTAATTTAAATGATTCTTTGTATGAATCTCTTGCAACTCCTGTCTTTAAGAGCAATGAAAACGTGTTATTTACAACTGGACTAATTCGTCATGCACATTCATGTTCCTTAGCTTCTGATTTACAAGTTGAGTTTTCTGAAATTGGTTCACCAACACTCACAGTCGATGATAGTCATGAAGATATGTGGGGTGCAAATGAAAGTTGTGATCTTGATGTTTTAGAGCCAAACAATTGGAGGGAAGTTGGTTCTTCGTCCTTTTCCTTACGATATATTGATGAAGAAAATGGAGGTGAATTGAATTTTAGGTCTCTGAGATCTGACATGCGTGATGATACTCCAACTTATACAATGTGTACGGATCATAACATCTTTGGTAATGCGAGACAAATGGGTGTATCACAATATTCTTCTAATGTGTTAGCGCGTTGGAAGCGGTTGATGAGGTTGATGGATACTCGTGTTAATCAGTCACCACATGAAATGCTTTCAGAAGAACAAGAGGAATTTAACCAGATAGATAACTTACTAAACAAGCAACAAATTAGCAATGAAGTTAATGACTCAGAAGCCACTAATCAAGACAATACAAATGACTTAAGGAGCAATGAAGAGGCTGGTGCATCGATTACGCGACAAGAAGCACCCGATGAAATCTCAACTATCACAAATTCATCATCATCGTCATCATCACCAACGTCTGTATTTCCTATACCACATCCGACGGCAGCAGATCAAGAGATACACACGGGTGTTCAACAATCTAATATGGAGGATGTGGCATACGAAACAGTAAATGGTAATGGTTTACTTGATTCAATGCCTCAAAATGTTCAACTTTCCGTGGACTATTCAAATGTCGAATCACATAATAGTGACTTGGATAATTCTCAGGTGCAATTTATTTCTCCAATGGTAGAATCATCCTCAGAAATTCACATAGAGAATGAAGGAAAATCTCAGGAATCATTGACAGAAGAGGCTAGCATGAAACCGTTTATCAATTTTGAAACAATAGACACAAATTTTGGTAAAGATTTTGAAGGAAAACATGATGGCTTAAATGAAAATGAAGCCGAAAATCATAGCTCGAAAGAAGAGAACTATTTGGAAAGTGAGTCAAATCAAATAGTTAACAATCATGTAGAGAATGAACCATTGGACAAAGATGAAGACATCTGTGAAGATTCATCACTACCAATTTTCATTGACGGAGCCATTAACGATGATGATACATTAGGAGAATATGAGAATACGAACAAGAACGAAACCACTGATCAAGAATTGGAAAGAGATAATCAAATCATGGTTTTATCTCAAACAAATGGAGAAACTGATTAG 2727 0.3491 MGLNSRDIKLHVFKVLHLSIEKSYDFMKKHPRISGAMLVFFIMYIFLSCIYNLLVFLSPFLVFTAILVTLFWSSEQTHIKCVEKKEKEKKVDAKNLSNVYTKDRRGMLYKYPSQNATSRRRNFTGKKLDVYGDLEQKAKNLSAVFRNEFTKKNTDIRSGKIFFDKEMDPYFDSKFTSRKVDVPLKQTLHATQPSMVDLVTCNTSYYDCQETNIEKTEEEKKAIEDNSIGNNKGVELKEDDKKKLMDLGICEMERNKRLESLIARRRARKQLNLEIENGLIDIESITPNQISPLLVARMDPFDSLIYFEDIEMPGSAPSTLRSPFDIPYEPFEEKPNLKGDILDHEFTTNTPLEPKYDLLQLKEHRLPSSRVRRLSGLANHDGLEKLNSLEGCESKLQAPNPSNEGEETTHDDKGKCKLDIVGMQSEEENKNDPTITNIEEVINLTSNPQDEFLDFPLSSTNVTNLNDSLYESLATPVFKSNENVLFTTGLIRHAHSCSLASDLQVEFSEIGSPTLTVDDSHEDMWGANESCDLDVLEPNNWREVGSSSFSLRYIDEENGGELNFRSLRSDMRDDTPTYTMCTDHNIFGNARQMGVSQYSSNVLARWKRLMRLMDTRVNQSPHEMLSEEQEEFNQIDNLLNKQQISNEVNDSEATNQDNTNDLRSNEEAGASITRQEAPDEISTITNSSSSSSSPTSVFPIPHPTAADQEIHTGVQQSNMEDVAYETVNGNGLLDSMPQNVQLSVDYSNVESHNSDLDNSQVQFISPMVESSSEIHIENEGKSQESLTEEASMKPFINFETIDTNFGKDFEGKHDGLNENEAENHSSKEENYLESESNQIVNNHVENEPLDKDEDICEDSSLPIFIDGAINDDDTLGEYENTNKNETTDQELERDNQIMVLSQTNGETD 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00917 908 MobiDBLite consensus disorder prediction 669 699 - -
Vifa1g00917 908 MobiDBLite consensus disorder prediction 809 835 - -
Vifa1g00917 908 PANTHER CARDIOMYOPATHY-ASSOCIATED PROTEIN 7 828 - -
Vifa1g00917 908 Coils Coil 206 226 - -
Vifa1g00917 908 MobiDBLite consensus disorder prediction 394 413 - -
Vifa1g00917 908 MobiDBLite consensus disorder prediction 669 703 - -
Vifa1g00917 908 MobiDBLite consensus disorder prediction 809 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00917 Vifa-Chr1 154539556 154542564 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00917 - - psat:127122333 1081.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00917 1 154539556 154542564 Vifa1g00917 1 154539556 154542564 ECH
Vifa2g01130 2 304070633 304072387 Vifa1g00917 1 154539556 154542564 PCT