Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g00843 | ATGGCGAACCCATCCGGGACTGGTAACCATCAGGAACAACATGCTCATGTTAACCCTTCCAATTTTAACGGCAATTCGGTTCCCGAGAGTTCTTCAGGGCTTGTCATGAACATGAAGCATAATCCAGGGATTTCTCTTGATTGGACGCCGGAAGAACAAGCTACCCTCGAAGACGGACTCTCAAAATATGCCTCAGAATCTAACATAGTACGCTATGCAAAGATAGCACAACAGCTGAATAACAAGACAGTCCGGGATGTTGCTCTGCGTGTCAGGTGGATGAATAAGAAAGAAAATAGCAAGAGAAGGAAGGATGATCACAACTTGTCCCGAAAAAGTAAAGATAAAAAGGAAAGGGTTTCTGATCCCGCAGCAAAATCGTCTCAATTTTCTGCTCGACCCAATGTTCCTCCATATGCGCCACCAATGATTGCAATGGACAATGATGATGGCATCCCATATGCAGCAATTGGAGGTCCTACTGCTGAGCTATTAGAGCAAAATGCACGGGCCTTGAGCAGAGTCTCTGCAAACCTTTCCTCTCTCCAGATTCAGGACAACATCAATCTTTTGCGCCAAACTAGAGACAACATCATTAGAATAATGAATGAGATGAATGATTCACCCGAGGTGATGAAGCAAATGCCACCTCTTCCTGTGAAGATGAATGAAGAACTGGCCAATTCCATACTTCCAATTCCAAGAACACCTCTCCAGCCTCAGTCATGA | 729 | 0.4472 | MANPSGTGNHQEQHAHVNPSNFNGNSVPESSSGLVMNMKHNPGISLDWTPEEQATLEDGLSKYASESNIVRYAKIAQQLNNKTVRDVALRVRWMNKKENSKRRKDDHNLSRKSKDKKERVSDPAAKSSQFSARPNVPPYAPPMIAMDNDDGIPYAAIGGPTAELLEQNARALSRVSANLSSLQIQDNINLLRQTRDNIIRIMNEMNDSPEVMKQMPPLPVKMNEELANSILPIPRTPLQPQS | 242 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g00843 | 242 | MobiDBLite | consensus disorder prediction | 95 | 142 | - | - | |
Vifa1g00843 | 242 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Vifa1g00843 | 242 | Gene3D | - | 48 | 122 | - | - | |
Vifa1g00843 | 242 | PANTHER | FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED | 6 | 237 | - | - | |
Vifa1g00843 | 242 | CDD | SANT | 48 | 97 | IPR001005 | - | |
Vifa1g00843 | 242 | Pfam | Protein of unknown function (DUF3755) | 181 | 214 | IPR022228 | - | |
Vifa1g00843 | 242 | SMART | sant | 44 | 97 | IPR001005 | - | |
Vifa1g00843 | 242 | SUPERFAMILY | Homeodomain-like | 40 | 101 | IPR009057 | - | |
Vifa1g00843 | 242 | MobiDBLite | consensus disorder prediction | 95 | 123 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g00843 | Vifa-Chr1 | 143733276 | 143737151 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Vifa1g00843 | DUF3755 | 1.4e-14 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g00843 | - | - | cam:101498979 | 430.639 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vifa1g00843 | 1 | 143733276 | 143737151 | Vifa6g00886 | 6 | 304575387 | 304578316 | PCT |