Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00816 ATGGGGAAGCAAAATGCTGCTGCTGCAGCGATGAACCCGGGTGTCGATATGAATATGAATTCAAGGAATGAGGCGGGTTTTACGTGTCCTCCGAACCTCATTTCTGAGGATAAACTCCCTAATGGTAGTCATTTGAAGGGTTTTAAGGAGGAAACTACACAGAATCGGGAATCGGGCTTTCCTCAGAAACAGTTTCTTGTCATTGATCAAACCGGTGATCAGACAACTCTCATTTATAGTTCGAGATTCGGGAGACCTGTCGAGTGCCTTGGTTCATGGGATTCCAAATTTCATGGTTGTAACAATTTGAATGCGAATAATGAACCTTCTTTAAGAAGAGATGTAAATCATGTCGTTGGAGTTGAACCAACTTTTGATTATAAAGTTGATGAAAATGAGAATCAAGGAACCGAGATTGAAAGCGAGATGCACGAAGACACGGAGGAGATCAATGCATTGCTTTATTCTGACAGCGACGGTTATTCTACTGAGGATGATGAAGTTACCAGCACAGGACATTCACCCAGTACAACGACCACTCATGACAACCAGGATCCTTATGGAATTGGAGGAATTGCTGAAGAAGTTGCTAGCTCCTCCCCTGGTAAGACAAAGAAACGTAAGCTTTTCGATGTGGCTTATGACGATGTGCAGTTTATGGATACTGCAAATTCTCTAAAACGGAACCAGCCCTGTGACCTGAATCAGAACAATGGCGATGATAATGATGCAGAATCAAGATGCTCTGGTAGCAATTATGGTCAAGGGTCTGGTGAAATGGGTTCTTTAGCATGCACCAAGAAGATGAGAAAGGAAAAGATTCAAAATGTTCTAAGCATTTTGCAGTGCATAGTACCTAACGGGAAGGATAAGAACCCAATCCAGCTTCTGGATGATGCGATACGTTGCTTGAATTCTTTGAAACTCAAAGCTAGAGCTCTCGGCCTCAATGCCTTGTAA 960 0.4271 MGKQNAAAAAMNPGVDMNMNSRNEAGFTCPPNLISEDKLPNGSHLKGFKEETTQNRESGFPQKQFLVIDQTGDQTTLIYSSRFGRPVECLGSWDSKFHGCNNLNANNEPSLRRDVNHVVGVEPTFDYKVDENENQGTEIESEMHEDTEEINALLYSDSDGYSTEDDEVTSTGHSPSTTTTHDNQDPYGIGGIAEEVASSSPGKTKKRKLFDVAYDDVQFMDTANSLKRNQPCDLNQNNGDDNDAESRCSGSNYGQGSGEMGSLACTKKMRKEKIQNVLSILQCIVPNGKDKNPIQLLDDAIRCLNSLKLKARALGLNAL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00816 319 MobiDBLite consensus disorder prediction 227 253 - -
Vifa1g00816 319 MobiDBLite consensus disorder prediction 165 185 - -
Vifa1g00816 319 MobiDBLite consensus disorder prediction 158 190 - -
Vifa1g00816 319 PANTHER TRANSCRIPTION FACTOR BHLH145 3 317 IPR037546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00816 Vifa-Chr1 139217632 139218690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00816 62 312 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 32.540 1.21e-23 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00816 - - tpra:123920090 483.411