Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00815 ATGGGAGAGAATTGCGGAACCTGGACGCATCAGGTGCAATTTAGTCAATCACCCAATTTGAATTCTTTCTGTGCTCCCTTTGATATGGGGAAGCAAAATGCTGCTGCTGCAGCGATGAACCCGGGTGTCGATATGAATATGAATTCAAGGAATGAGGCGGGTTTTACGTGTCCTCCGAACCTCATTTCTGAGGATAAACTCCCTAATGGTAGTCATTTGAAGGGTTTTAAGGAGGAAACTACACAGAATCGGGAATCGGGCTTTCCTCAGAAACAGTTTCTTGTCATTGATCAAACCGGTGATCAGACAACTCTCATTTATAGTTCGAGATTCGGGAGACCTGTCGAGTGCCTTGGTTCATGGGATTCCAAATTTCATGGTTGTAACAATTTGAATGCGAATAATGAACCTTCTTTAAGAAGAGATGTAAATCATGTCGTTGGAGTTGAACCAACTTTTGATTATAAAGTTGATGAAAATGAGAATCAAGGAACCGAGATTGAAAGCGAGATGCACGAAGACACGGAGGAGATCAATGCATTGCTTTATTCTGACAGCGACGGTTATTCTACTGAGGATGATGAAGTTACCAGCACAGGACATTCACCCAGTACAACGACCACTCATGACAACCAGGATCCTTATGGAATTGGAGGAATTGCTGAAGAAGTTGCTAGCTCCTCCCCTGGTAAGACAAAGAAACGTAAGCTTTTCGATGTGGCTTATGACGATGTGCAGTTTATGGATACTGCAAATTCTCTAAAACGGAACCAGCCCTGTGACCTGAATCAGAACAATGGCGATGATAATGATGCAGAATCAAGATGCTCTGGTAGCAATTATGGTCAAGGGTCTGGTGAAATGGGTTCTTTAGCATGCACCAAGAAGATGAGAAAGGAAAAGATTCAAAATGTTCTAAGCATTTTGCAGTGCATAGTACCTAACGGGAAGGATAAGAACCCAATCCAGCTTCTGGATGATGCGATACGTTGCTTGAATTCTTTGAAACTCAAAGCTAGAGCTCTCGGCCTCAATGCCTTGTAA 1044 0.4282 MGENCGTWTHQVQFSQSPNLNSFCAPFDMGKQNAAAAAMNPGVDMNMNSRNEAGFTCPPNLISEDKLPNGSHLKGFKEETTQNRESGFPQKQFLVIDQTGDQTTLIYSSRFGRPVECLGSWDSKFHGCNNLNANNEPSLRRDVNHVVGVEPTFDYKVDENENQGTEIESEMHEDTEEINALLYSDSDGYSTEDDEVTSTGHSPSTTTTHDNQDPYGIGGIAEEVASSSPGKTKKRKLFDVAYDDVQFMDTANSLKRNQPCDLNQNNGDDNDAESRCSGSNYGQGSGEMGSLACTKKMRKEKIQNVLSILQCIVPNGKDKNPIQLLDDAIRCLNSLKLKARALGLNAL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00815 347 PANTHER TRANSCRIPTION FACTOR BHLH145 11 345 IPR037546 -
Vifa1g00815 347 MobiDBLite consensus disorder prediction 193 213 - -
Vifa1g00815 347 MobiDBLite consensus disorder prediction 255 281 - -
Vifa1g00815 347 MobiDBLite consensus disorder prediction 186 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00815 Vifa-Chr1 139217548 139218690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00815 90 340 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 32.540 1.68e-23 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00815 - - tpra:123920090 528.48