Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00802 ATGGAAAACCAAAACAAGAACACGGCGGCGAGAAAACCAAGGTTTTTGTGCCTTCATGGCTTTCGAACAAGAATTTTCGATCCTCCTTATTACGAGTGGTTCCAGTTCAACAAGGAGTTTACAGAGTACACCAAATTTGATGAGTGTTTACAATTTACTGAGGATTACATGATCAAACATGGACCGTTTGACGGTCTTCTTGGTTTCTCACAGGGGGCGATATTATCAGGTGCGCTGCCGGGTCTTCAGGAGAAGGGTGTGGCACTAAGAAAAGTTCCGAAAGTGAAATTTCTTATAATAATAGGAGGGGCTAAGTTTTTGGAACCTTCACTGGTAGAGAAAGCATATTCTTCAAAAATTGGTTGTCCCTCTCTTCATTTTATAGGAGAGAATGATTTTTTAAAGCAGCATGGAAAAGAACTCATAGAATCATGTGTTGAACCTGTGGTAATTCATCACCCAAAAGGACACACGGTACCAAGATTAGATGATAAAAGCTTGAATATCATGACAGACTTTATTGAAAGAATTCAAAAGGATATATCTCAAATTAAGGAATGA 561 0.3868 MENQNKNTAARKPRFLCLHGFRTRIFDPPYYEWFQFNKEFTEYTKFDECLQFTEDYMIKHGPFDGLLGFSQGAILSGALPGLQEKGVALRKVPKVKFLIIIGGAKFLEPSLVEKAYSSKIGCPSLHFIGENDFLKQHGKELIESCVEPVVIHHPKGHTVPRLDDKSLNIMTDFIERIQKDISQIKE 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00802 186 SUPERFAMILY alpha/beta-Hydrolases 12 176 IPR029058 -
Vifa1g00802 186 Pfam Serine hydrolase (FSH1) 27 164 IPR005645 -
Vifa1g00802 186 PANTHER OVARIAN CANCER GENE-2 PROTEIN-RELATED 24 183 - -
Vifa1g00802 186 Gene3D alpha/beta hydrolase 23 182 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00802 Vifa-Chr1 134733412 134734756 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00802 26 160 Sulfurtransferasese or Rhodanese AT1G09280 29.861 1.26e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00802 - - lja:Lj1g3v0244710.1 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00802 1 134733412 134734756 Vifa1g00802 1 134733412 134734756 ECH