Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00675 ATGGCTACTACCAGCGCTGGATCCAGCAATCCTACTGCTAATAGACCACAAACGAAACGACCTAAGTACGAGGATGCATGTGTACCGTCAAATTGGACGGACAAGGTAGCGTTCATTCAGAGTAATGCTGATAAAACTTGTACATGGAAGCTGGAAGTGCCAAAGCGTATGAAGTCTCCTATCCATGTTTACTACCAACTTGATAACTTCTACCAAAATCATCGCCGCTCCAACAACCCACCACCTAGAGCAGCATGCCAAAGTTGTGCCGATGGTGGAGTACTTGGAGTAGTTCCTGGTATAATTGGTTGTCTCCAAGCTCTTGAGGCGATTAAGATTGCTGCTTCTGTTGGTGAACCACTCTCTGGAAGGATGCTTCTCTTAGATGCATTGGCTGCACGAATCCGTATTATTAAAATCAGAGGAAGGTCTTTGCAATGTGAAGCTTGTGGAGAAAATGCAATAATGAATCAGCAGTACTTTAGAGAATTTGATTATGAGAAGTTCACTCAAACTCCCTTGTCTGAGGCTCCGTTGAAGTTAAATTTACTTCCCAGTGAGTCTAAAATCAGCAGCAAGAAGTACAACGAAATCATTCTCAACAAGGAACCACATGTTCTTGTCGATGTTAGACCAGCTCATCATTTCAAGATTGTGTCCCTTCCAAATTCCGTCAAAGGCGTAACTTTCTTGTGA 696 0.431 MATTSAGSSNPTANRPQTKRPKYEDACVPSNWTDKVAFIQSNADKTCTWKLEVPKRMKSPIHVYYQLDNFYQNHRRSNNPPPRAACQSCADGGVLGVVPGIIGCLQALEAIKIAASVGEPLSGRMLLLDALAARIRIIKIRGRSLQCEACGENAIMNQQYFREFDYEKFTQTPLSEAPLKLNLLPSESKISSKKYNEIILNKEPHVLVDVRPAHHFKIVSLPNSVKGVTFL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00675 231 PANTHER CELL CYCLE CONTROL PROTEIN 50 20 76 IPR005045 GO:0016020
Vifa1g00675 231 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 77 225 IPR035985 GO:0008641
Vifa1g00675 231 MobiDBLite consensus disorder prediction 1 17 - -
Vifa1g00675 231 Gene3D - 188 227 IPR036873 -
Vifa1g00675 231 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 17 77 IPR005045 GO:0016020
Vifa1g00675 231 Gene3D - 27 157 - -
Vifa1g00675 231 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00675 Vifa-Chr1 113790837 113791801 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00675 80 225 Sulfurtransferasese or Rhodanese AT5G55130 67.808 1.06e-68 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00675 K11996 - gmx:100801820 240.35