Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00596 ATGGACGCGCGTCGTGGCTCACGCGCCGTCATTGACCCTAAAATTCGCATGGTCGGTTTCTTCGCTCCACCCGCTCCGATTCCGTTCGAGTTCTCTCCTTCCGGTAATTCACACTCTCCGGTTATGATCCCTCCGCCGCTTCATTCATCGGAAAATCTCGAACTCCATTCTCAATCTCAACCTTCCGTCACTTCAACTTCCCGGGATGAAACTATTGCCGTCTCCAGTGGCCAGAATAGCTGCTCCGAAGAGATATTTCCTGCTCCGATGTCTCTCTCTCCGTCGCCGGTGGCTTCTACCTTACCTCGCTGTGGCGGAATTCCGATGTGCAATTTGACTACGGTTTCTGTGGTCAATGCTGATTCGTTTGCCATTGACGAAAGAGAGAAGCCAATCAAAGGAGGAGGATCTGCAGTGGAAGTTAAAGACGAAGCTGTGAATTCAAAACAGAAGAAAGACAAATCCTCAAAAGCTGAAAGAAGAGCTCTTCAAGAAGCAAAGGATGCGGCAAAGGCTGCTGCAAAAGCTGAAGGAAATACGGCATCTAGAACTGCAACTTCAGCGAATGTAAAATCAGCTAAAGCTGCAAAGCCCCCACACAAAGATGTTAATACTTCAGCTGTGGCTTCTGAGAAAAAGGGAGGTGATCGGTCATCAGAGAAGGATAGGAAAAAAGATGTTCCTCACCCACGCATGCAGTATGATGATAAGAGCAGAGTGGAGAAAGCTAAACGACGTGCTGTGGTAAACCAAACTGAATCCAGGAACAGAGTTGAACTATTCAGACATTTGCCACAGTATGAACATGGGAGTCAGCTTCCTGATCTTGAGGCAAAGTTTTTCCAGCTTGGTCCTGTGCATCCTTCAGTTTATAAGGTGGGTTTGCAGTATCTGTCTGGAGATATTTCTGGTGGCAATGCTCGTTGTATTGCTATGCTTCAAGCATTCCAGGATGCAATCAAAGACTACACAGTTCCACGTGGGAAGACTCTAGTGAGAGACTTGACAGCAAAAATAAGTAGCTATGTTTCATTCCTTATTGAGTGTCGACCTCTTTCAGTCAGTATGGGAAATGCAATTAGATTTCTCAAAAGTCGAATTTCACAGCTGCCTCGGACACAGTCTGAGTCAGAATCCAAAACTTCTCTTCAATCAGATATTGAGCGTTTTATATATGAGAAGATTATACTTGCTGACAAGATGATAGTAGAGCTTGCAGTCACAAAAATAAGAGATGGCGATGTTCTTCTTACTTATGGGTCATCGTCAGCAGTTGAAATGATACTGTTACATGCACATAAATTAGGGAAACAGTTTCGAGTTGTAGTAGTAGATTCTCGTCCAAGTCATAGAGGGAAAATTTTGCTTCGGAGACTAGTGGAGGAAGGTCTTAGTTGTACATACACTCATATCAATGCTGTTTCCTACATAATGCATGAGGTTACTCGAGTTTTTCTGGGTGCTTCATCAGTGTTGTCTAATGGAACAGTATATTCAGGAGTTGGGACTGCATGTGTTGCAATGGTTGCTCATGCATTCCATGTCCCTGTTATAGTTTGTTGTGAAGCTTTTAAATTTCATGAAAGGGTACAGCTTGACTCAATATGCTCAAATGAACTTGGTGATCCAGATGTCGTTTCAAAGGTTTCGGGTAGACAGGATGTTAACCACTTAGATGCTTGGTCCAATACTGAAAATCTGCAACTTCTAAATCTGATCTACGATGCAACGCCTTCAGATTATGTTTCAATGATTGTCACCGATTATGGCATGATCCCCCCTACAAGTGTTCCTGTCGTTGTACGGGAATATAACAGAGAACATGTATGGACATAA 1836 0.4368 MDARRGSRAVIDPKIRMVGFFAPPAPIPFEFSPSGNSHSPVMIPPPLHSSENLELHSQSQPSVTSTSRDETIAVSSGQNSCSEEIFPAPMSLSPSPVASTLPRCGGIPMCNLTTVSVVNADSFAIDEREKPIKGGGSAVEVKDEAVNSKQKKDKSSKAERRALQEAKDAAKAAAKAEGNTASRTATSANVKSAKAAKPPHKDVNTSAVASEKKGGDRSSEKDRKKDVPHPRMQYDDKSRVEKAKRRAVVNQTESRNRVELFRHLPQYEHGSQLPDLEAKFFQLGPVHPSVYKVGLQYLSGDISGGNARCIAMLQAFQDAIKDYTVPRGKTLVRDLTAKISSYVSFLIECRPLSVSMGNAIRFLKSRISQLPRTQSESESKTSLQSDIERFIYEKIILADKMIVELAVTKIRDGDVLLTYGSSSAVEMILLHAHKLGKQFRVVVVDSRPSHRGKILLRRLVEEGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSGVGTACVAMVAHAFHVPVIVCCEAFKFHERVQLDSICSNELGDPDVVSKVSGRQDVNHLDAWSNTENLQLLNLIYDATPSDYVSMIVTDYGMIPPTSVPVVVREYNREHVWT 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00596 611 MobiDBLite consensus disorder prediction 133 251 - -
Vifa1g00596 611 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 34 608 - -
Vifa1g00596 611 MobiDBLite consensus disorder prediction 213 251 - -
Vifa1g00596 611 Gene3D - 398 604 IPR042529 -
Vifa1g00596 611 Pfam Initiation factor 2 subunit family 302 594 IPR000649 GO:0044237
Vifa1g00596 611 SUPERFAMILY NagB/RpiA/CoA transferase-like 286 604 IPR037171 -
Vifa1g00596 611 MobiDBLite consensus disorder prediction 144 172 - -
Vifa1g00596 611 MobiDBLite consensus disorder prediction 51 80 - -
Vifa1g00596 611 MobiDBLite consensus disorder prediction 32 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00596 Vifa-Chr1 100438613 100444461 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00596 1 610 Eukaryotic Initiation Factors Gene Family AT5G38640 61.002 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00596 K03680 - gmx:100785938 926.006
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00596 1 100438613 100444461 Vifa1g00596 1 100438613 100444461 ECH